Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TOMM40O96008 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TOMM40O96008 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TOMM40O96008 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TOMM40O96008 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TOMM40O96008 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.01■□□□□ 0.47
TOMM40O96008 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TOMM40O96008 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
TOMM40O96008 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TOMM40O96008 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TOMM40O96008 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.01■□□□□ 0.47
TOMM40O96008 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18■□□□□ 0.47
TOMM40O96008 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TOMM40O96008 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TOMM40O96008 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TOMM40O96008 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TOMM40O96008 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TOMM40O96008 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TOMM40O96008 AL592293.1-201ENST00000502889 1188 ntBASIC18■□□□□ 0.47
TOMM40O96008 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TOMM40O96008 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18■□□□□ 0.47
TOMM40O96008 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TOMM40O96008 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TOMM40O96008 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TOMM40O96008 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TOMM40O96008 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TOMM40O96008 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TOMM40O96008 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TOMM40O96008 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TOMM40O96008 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.99■□□□□ 0.47
TOMM40O96008 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOMM40O96008 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOMM40O96008 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOMM40O96008 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOMM40O96008 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOMM40O96008 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.98■□□□□ 0.47
TOMM40O96008 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOMM40O96008 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.98■□□□□ 0.47
TOMM40O96008 ABCB10P4-201ENST00000566803 2184 ntBASIC17.98■□□□□ 0.47
TOMM40O96008 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TOMM40O96008 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TOMM40O96008 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.98■□□□□ 0.47
TOMM40O96008 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.98■□□□□ 0.47
TOMM40O96008 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
TOMM40O96008 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.97■□□□□ 0.47
TOMM40O96008 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
TOMM40O96008 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TOMM40O96008 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOMM40O96008 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TOMM40O96008 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOMM40O96008 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOMM40O96008 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOMM40O96008 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TOMM40O96008 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TOMM40O96008 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TOMM40O96008 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
TOMM40O96008 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TOMM40O96008 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.96■□□□□ 0.47
TOMM40O96008 SPCS2P3-201ENST00000500401 656 ntBASIC17.96■□□□□ 0.47
TOMM40O96008 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TOMM40O96008 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOMM40O96008 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TOMM40O96008 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TOMM40O96008 DUSP8P5-201ENST00000422884 1815 ntBASIC17.95■□□□□ 0.46
TOMM40O96008 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.95■□□□□ 0.46
TOMM40O96008 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TOMM40O96008 AL592295.1-201ENST00000400984 884 ntBASIC17.95■□□□□ 0.46
TOMM40O96008 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.95■□□□□ 0.46
TOMM40O96008 AC087393.1-201ENST00000582896 145 ntBASIC17.95■□□□□ 0.46
TOMM40O96008 MIR6765-201ENST00000614092 87 ntBASIC17.95■□□□□ 0.46
TOMM40O96008 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TOMM40O96008 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.95■□□□□ 0.46
TOMM40O96008 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.95■□□□□ 0.46
TOMM40O96008 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TOMM40O96008 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
TOMM40O96008 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TOMM40O96008 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.94■□□□□ 0.46
TOMM40O96008 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TOMM40O96008 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.94■□□□□ 0.46
TOMM40O96008 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TOMM40O96008 AC090877.2-201ENST00000558441 1738 ntBASIC17.94■□□□□ 0.46
TOMM40O96008 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.94■□□□□ 0.46
TOMM40O96008 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TOMM40O96008 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TOMM40O96008 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.93■□□□□ 0.46
TOMM40O96008 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TOMM40O96008 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TOMM40O96008 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.93■□□□□ 0.46
TOMM40O96008 AL024507.2-201ENST00000606070 2574 ntBASIC17.93■□□□□ 0.46
TOMM40O96008 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TOMM40O96008 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TOMM40O96008 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TOMM40O96008 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TOMM40O96008 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TOMM40O96008 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
TOMM40O96008 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TOMM40O96008 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TOMM40O96008 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TOMM40O96008 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TOMM40O96008 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms