Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC36.53■■■■□ 3.44
PCF11O94913 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC36.53■■■■□ 3.44
PCF11O94913 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC36.52■■■■□ 3.44
PCF11O94913 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC36.52■■■■□ 3.44
PCF11O94913 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC36.52■■■■□ 3.44
PCF11O94913 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC36.52■■■■□ 3.44
PCF11O94913 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC36.51■■■■□ 3.44
PCF11O94913 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.44
PCF11O94913 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.44
PCF11O94913 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC36.51■■■■□ 3.44
PCF11O94913 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC36.51■■■■□ 3.44
PCF11O94913 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.44
PCF11O94913 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC36.51■■■■□ 3.44
PCF11O94913 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC36.51■■■■□ 3.44
PCF11O94913 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC36.5■■■■□ 3.43
PCF11O94913 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC36.5■■■■□ 3.43
PCF11O94913 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC36.5■■■■□ 3.43
PCF11O94913 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC36.49■■■■□ 3.43
PCF11O94913 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC36.49■■■■□ 3.43
PCF11O94913 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC36.49■■■■□ 3.43
PCF11O94913 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC36.48■■■■□ 3.43
PCF11O94913 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC36.48■■■■□ 3.43
PCF11O94913 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC36.48■■■■□ 3.43
PCF11O94913 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC36.48■■■■□ 3.43
PCF11O94913 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC36.48■■■■□ 3.43
PCF11O94913 CEBPA-AS1-201ENST00000592982 2198 ntBASIC36.48■■■■□ 3.43
PCF11O94913 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC36.47■■■■□ 3.43
PCF11O94913 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC36.47■■■■□ 3.43
PCF11O94913 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
PCF11O94913 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC36.46■■■■□ 3.43
PCF11O94913 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC36.46■■■■□ 3.43
PCF11O94913 AC145676.1-201ENST00000514988 2004 ntBASIC36.46■■■■□ 3.43
PCF11O94913 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC36.46■■■■□ 3.43
PCF11O94913 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC36.45■■■■□ 3.43
PCF11O94913 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC36.45■■■■□ 3.43
PCF11O94913 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC36.45■■■■□ 3.43
PCF11O94913 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC36.45■■■■□ 3.43
PCF11O94913 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC36.45■■■■□ 3.42
PCF11O94913 EBPL-204ENST00000378272 766 ntTSL 3 BASIC36.44■■■■□ 3.42
PCF11O94913 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC36.44■■■■□ 3.42
PCF11O94913 AC133561.4-201ENST00000566112 224 ntBASIC36.44■■■■□ 3.42
PCF11O94913 MIR5787-201ENST00000611784 55 ntBASIC36.44■■■■□ 3.42
PCF11O94913 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC36.44■■■■□ 3.42
PCF11O94913 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC36.44■■■■□ 3.42
PCF11O94913 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC36.44■■■■□ 3.42
PCF11O94913 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC36.44■■■■□ 3.42
PCF11O94913 AL031432.3-201ENST00000607698 485 ntBASIC36.44■■■■□ 3.42
PCF11O94913 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC36.43■■■■□ 3.42
PCF11O94913 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC36.43■■■■□ 3.42
PCF11O94913 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC36.43■■■■□ 3.42
PCF11O94913 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
PCF11O94913 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC36.43■■■■□ 3.42
PCF11O94913 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC36.43■■■■□ 3.42
PCF11O94913 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC36.42■■■■□ 3.42
PCF11O94913 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC36.42■■■■□ 3.42
PCF11O94913 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC36.42■■■■□ 3.42
PCF11O94913 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC36.42■■■■□ 3.42
PCF11O94913 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
PCF11O94913 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC36.41■■■■□ 3.42
PCF11O94913 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC36.41■■■■□ 3.42
PCF11O94913 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
PCF11O94913 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
PCF11O94913 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC36.4■■■■□ 3.42
PCF11O94913 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
PCF11O94913 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC36.4■■■■□ 3.42
PCF11O94913 AC106739.1-201ENST00000617035 715 ntBASIC36.4■■■■□ 3.42
PCF11O94913 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
PCF11O94913 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC36.39■■■■□ 3.42
PCF11O94913 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC36.39■■■■□ 3.42
PCF11O94913 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC36.38■■■■□ 3.41
PCF11O94913 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC36.38■■■■□ 3.41
PCF11O94913 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
PCF11O94913 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
PCF11O94913 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC36.37■■■■□ 3.41
PCF11O94913 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC36.37■■■■□ 3.41
PCF11O94913 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC36.37■■■■□ 3.41
PCF11O94913 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC36.37■■■■□ 3.41
PCF11O94913 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC36.37■■■■□ 3.41
PCF11O94913 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC36.37■■■■□ 3.41
PCF11O94913 AC135279.3-201ENST00000610945 1311 ntBASIC36.37■■■■□ 3.41
PCF11O94913 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC36.36■■■■□ 3.41
PCF11O94913 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC36.36■■■■□ 3.41
PCF11O94913 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
PCF11O94913 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC36.36■■■■□ 3.41
PCF11O94913 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC36.36■■■■□ 3.41
PCF11O94913 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC36.35■■■■□ 3.41
PCF11O94913 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC36.35■■■■□ 3.41
PCF11O94913 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC36.35■■■■□ 3.41
PCF11O94913 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC36.35■■■■□ 3.41
PCF11O94913 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
PCF11O94913 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC36.34■■■■□ 3.41
PCF11O94913 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC36.34■■■■□ 3.41
PCF11O94913 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
PCF11O94913 AC005703.6-201ENST00000623265 1329 ntBASIC36.34■■■■□ 3.41
PCF11O94913 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
PCF11O94913 CD37-213ENST00000598095 1598 ntTSL 2 BASIC36.34■■■■□ 3.41
PCF11O94913 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
PCF11O94913 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC36.33■■■■□ 3.41
PCF11O94913 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC36.33■■■■□ 3.41
PCF11O94913 GATM-206ENST00000558336 1522 ntTSL 2 BASIC36.33■■■■□ 3.41
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms