Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SSSCA1O60232 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SSSCA1O60232 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SSSCA1O60232 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SSSCA1O60232 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SSSCA1O60232 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SSSCA1O60232 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SSSCA1O60232 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SSSCA1O60232 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SSSCA1O60232 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
SSSCA1O60232 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.76■□□□□ 0.59
SSSCA1O60232 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SSSCA1O60232 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSSCA1O60232 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSSCA1O60232 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSSCA1O60232 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSSCA1O60232 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSSCA1O60232 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
SSSCA1O60232 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SSSCA1O60232 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.76■□□□□ 0.59
SSSCA1O60232 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSSCA1O60232 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.76■□□□□ 0.59
SSSCA1O60232 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
SSSCA1O60232 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SSSCA1O60232 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSSCA1O60232 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSSCA1O60232 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SSSCA1O60232 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSSCA1O60232 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.75■□□□□ 0.59
SSSCA1O60232 EP400NL-214ENST00000641289 2402 ntBASIC18.75■□□□□ 0.59
SSSCA1O60232 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSSCA1O60232 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSSCA1O60232 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSSCA1O60232 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSSCA1O60232 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
SSSCA1O60232 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSSCA1O60232 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SSSCA1O60232 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSSCA1O60232 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSSCA1O60232 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
SSSCA1O60232 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.74■□□□□ 0.59
SSSCA1O60232 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSSCA1O60232 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSSCA1O60232 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSSCA1O60232 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSSCA1O60232 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSSCA1O60232 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSSCA1O60232 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSSCA1O60232 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.74■□□□□ 0.59
SSSCA1O60232 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SSSCA1O60232 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SSSCA1O60232 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SSSCA1O60232 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.73■□□□□ 0.59
SSSCA1O60232 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SSSCA1O60232 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSSCA1O60232 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSSCA1O60232 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.73■□□□□ 0.59
SSSCA1O60232 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSSCA1O60232 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SSSCA1O60232 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SSSCA1O60232 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SSSCA1O60232 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SSSCA1O60232 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SSSCA1O60232 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
SSSCA1O60232 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSSCA1O60232 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSSCA1O60232 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSSCA1O60232 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SSSCA1O60232 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSSCA1O60232 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SSSCA1O60232 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSSCA1O60232 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSSCA1O60232 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSSCA1O60232 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSSCA1O60232 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SSSCA1O60232 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SSSCA1O60232 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SSSCA1O60232 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SSSCA1O60232 LINC00565-201ENST00000562710 2331 ntBASIC18.71■□□□□ 0.59
SSSCA1O60232 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSSCA1O60232 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SSSCA1O60232 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.71■□□□□ 0.59
SSSCA1O60232 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SSSCA1O60232 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSSCA1O60232 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SSSCA1O60232 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
SSSCA1O60232 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSSCA1O60232 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.7■□□□□ 0.58
SSSCA1O60232 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSSCA1O60232 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSSCA1O60232 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.7■□□□□ 0.58
SSSCA1O60232 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SSSCA1O60232 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSSCA1O60232 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSSCA1O60232 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.7■□□□□ 0.58
SSSCA1O60232 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSSCA1O60232 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSSCA1O60232 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.69■□□□□ 0.58
SSSCA1O60232 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSSCA1O60232 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms