Protein–RNA interactions for Protein: O43676

NDUFB3, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3O43676 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.25■□□□□ 0.67
NDUFB3O43676 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFB3O43676 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFB3O43676 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NDUFB3O43676 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NDUFB3O43676 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFB3O43676 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NDUFB3O43676 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.25■□□□□ 0.67
NDUFB3O43676 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.25■□□□□ 0.67
NDUFB3O43676 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.25■□□□□ 0.67
NDUFB3O43676 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFB3O43676 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
NDUFB3O43676 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFB3O43676 AC021242.3-201ENST00000607598 1377 ntBASIC19.24■□□□□ 0.67
NDUFB3O43676 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.24■□□□□ 0.67
NDUFB3O43676 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFB3O43676 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.24■□□□□ 0.67
NDUFB3O43676 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.24■□□□□ 0.67
NDUFB3O43676 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFB3O43676 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDUFB3O43676 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.23■□□□□ 0.67
NDUFB3O43676 MIR4787-201ENST00000607364 84 ntBASIC19.23■□□□□ 0.67
NDUFB3O43676 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDUFB3O43676 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NDUFB3O43676 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.22■□□□□ 0.67
NDUFB3O43676 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDUFB3O43676 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.22■□□□□ 0.67
NDUFB3O43676 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.22■□□□□ 0.67
NDUFB3O43676 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.22■□□□□ 0.67
NDUFB3O43676 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.22■□□□□ 0.67
NDUFB3O43676 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.22■□□□□ 0.67
NDUFB3O43676 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NDUFB3O43676 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.22■□□□□ 0.67
NDUFB3O43676 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NDUFB3O43676 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NDUFB3O43676 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.22■□□□□ 0.67
NDUFB3O43676 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.21■□□□□ 0.67
NDUFB3O43676 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDUFB3O43676 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NDUFB3O43676 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.21■□□□□ 0.67
NDUFB3O43676 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDUFB3O43676 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NDUFB3O43676 AL022069.1-201ENST00000568025 1636 ntBASIC19.21■□□□□ 0.67
NDUFB3O43676 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NDUFB3O43676 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.2■□□□□ 0.66
NDUFB3O43676 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFB3O43676 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFB3O43676 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFB3O43676 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFB3O43676 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFB3O43676 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFB3O43676 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.2■□□□□ 0.66
NDUFB3O43676 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFB3O43676 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NDUFB3O43676 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFB3O43676 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
NDUFB3O43676 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFB3O43676 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NDUFB3O43676 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFB3O43676 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NDUFB3O43676 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFB3O43676 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.19■□□□□ 0.66
NDUFB3O43676 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFB3O43676 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NDUFB3O43676 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFB3O43676 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NDUFB3O43676 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFB3O43676 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.18■□□□□ 0.66
NDUFB3O43676 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
NDUFB3O43676 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NDUFB3O43676 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.18■□□□□ 0.66
NDUFB3O43676 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.18■□□□□ 0.66
NDUFB3O43676 AL161729.1-201ENST00000604104 1402 ntBASIC19.17■□□□□ 0.66
NDUFB3O43676 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NDUFB3O43676 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NDUFB3O43676 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
NDUFB3O43676 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.17■□□□□ 0.66
NDUFB3O43676 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.17■□□□□ 0.66
NDUFB3O43676 AC092028.1-203ENST00000608262 953 ntBASIC19.17■□□□□ 0.66
NDUFB3O43676 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.17■□□□□ 0.66
NDUFB3O43676 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.17■□□□□ 0.66
NDUFB3O43676 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFB3O43676 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.16■□□□□ 0.66
NDUFB3O43676 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.16■□□□□ 0.66
NDUFB3O43676 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.16■□□□□ 0.66
NDUFB3O43676 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFB3O43676 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
NDUFB3O43676 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFB3O43676 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NDUFB3O43676 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.16■□□□□ 0.66
NDUFB3O43676 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFB3O43676 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
NDUFB3O43676 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NDUFB3O43676 AL139125.2-201ENST00000623134 1869 ntBASIC19.16■□□□□ 0.66
NDUFB3O43676 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.16■□□□□ 0.66
NDUFB3O43676 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.16■□□□□ 0.66
NDUFB3O43676 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NDUFB3O43676 AC135731.1-201ENST00000569415 2548 ntBASIC19.15■□□□□ 0.66
NDUFB3O43676 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
NDUFB3O43676 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms