Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.18■□□□□ 0.66
TSPAN4O14817 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN4O14817 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN4O14817 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TSPAN4O14817 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.17■□□□□ 0.66
TSPAN4O14817 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TSPAN4O14817 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.17■□□□□ 0.66
TSPAN4O14817 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN4O14817 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TSPAN4O14817 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN4O14817 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN4O14817 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN4O14817 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.17■□□□□ 0.66
TSPAN4O14817 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.17■□□□□ 0.66
TSPAN4O14817 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TSPAN4O14817 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.16■□□□□ 0.66
TSPAN4O14817 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN4O14817 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TSPAN4O14817 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.16■□□□□ 0.66
TSPAN4O14817 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN4O14817 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.16■□□□□ 0.66
TSPAN4O14817 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN4O14817 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TSPAN4O14817 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.16■□□□□ 0.66
TSPAN4O14817 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.15■□□□□ 0.66
TSPAN4O14817 AL137060.1-201ENST00000618151 2648 ntBASIC19.15■□□□□ 0.66
TSPAN4O14817 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TSPAN4O14817 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TSPAN4O14817 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TSPAN4O14817 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN4O14817 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.15■□□□□ 0.66
TSPAN4O14817 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TSPAN4O14817 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TSPAN4O14817 AC110285.7-201ENST00000624417 1536 ntBASIC19.15■□□□□ 0.66
TSPAN4O14817 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TSPAN4O14817 WHAMMP3-201ENST00000611636 1609 ntBASIC19.14■□□□□ 0.66
TSPAN4O14817 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.14■□□□□ 0.66
TSPAN4O14817 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN4O14817 AC137767.1-201ENST00000602918 1920 ntBASIC19.14■□□□□ 0.65
TSPAN4O14817 MIR3648-2-201ENST00000581792 180 ntBASIC19.14■□□□□ 0.65
TSPAN4O14817 MIR3648-1-201ENST00000615959 180 ntBASIC19.14■□□□□ 0.65
TSPAN4O14817 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.14■□□□□ 0.65
TSPAN4O14817 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN4O14817 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TSPAN4O14817 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
TSPAN4O14817 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN4O14817 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN4O14817 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN4O14817 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN4O14817 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN4O14817 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TSPAN4O14817 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN4O14817 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN4O14817 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN4O14817 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN4O14817 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN4O14817 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN4O14817 CR559946.2-201ENST00000623684 991 ntBASIC19.13■□□□□ 0.65
TSPAN4O14817 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
TSPAN4O14817 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN4O14817 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN4O14817 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN4O14817 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TSPAN4O14817 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.13■□□□□ 0.65
TSPAN4O14817 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
TSPAN4O14817 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.12■□□□□ 0.65
TSPAN4O14817 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN4O14817 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.12■□□□□ 0.65
TSPAN4O14817 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN4O14817 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN4O14817 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.12■□□□□ 0.65
TSPAN4O14817 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.12■□□□□ 0.65
TSPAN4O14817 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN4O14817 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TSPAN4O14817 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN4O14817 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.12■□□□□ 0.65
TSPAN4O14817 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.12■□□□□ 0.65
TSPAN4O14817 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TSPAN4O14817 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN4O14817 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TSPAN4O14817 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN4O14817 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TSPAN4O14817 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN4O14817 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.11■□□□□ 0.65
TSPAN4O14817 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TSPAN4O14817 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN4O14817 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.11■□□□□ 0.65
TSPAN4O14817 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN4O14817 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN4O14817 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN4O14817 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN4O14817 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TSPAN4O14817 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.1■□□□□ 0.65
TSPAN4O14817 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.1■□□□□ 0.65
TSPAN4O14817 AC233723.2-201ENST00000623798 2106 ntBASIC19.1■□□□□ 0.65
TSPAN4O14817 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN4O14817 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN4O14817 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN4O14817 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN4O14817 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms