Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UPK2O00526 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPK2O00526 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
UPK2O00526 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
UPK2O00526 U85056.1-201ENST00000616429 682 ntBASIC18.52■□□□□ 0.56
UPK2O00526 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPK2O00526 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPK2O00526 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
UPK2O00526 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.52■□□□□ 0.56
UPK2O00526 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
UPK2O00526 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK2O00526 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK2O00526 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK2O00526 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK2O00526 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UPK2O00526 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK2O00526 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.51■□□□□ 0.55
UPK2O00526 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPK2O00526 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
UPK2O00526 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK2O00526 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK2O00526 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK2O00526 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK2O00526 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
UPK2O00526 HSD17B1P1-201ENST00000590052 955 ntBASIC18.5■□□□□ 0.55
UPK2O00526 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK2O00526 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPK2O00526 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPK2O00526 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPK2O00526 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPK2O00526 LONRF2P2-201ENST00000439212 571 ntBASIC18.49■□□□□ 0.55
UPK2O00526 AC129492.7-201ENST00000622992 756 ntBASIC18.49■□□□□ 0.55
UPK2O00526 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
UPK2O00526 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
UPK2O00526 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.49■□□□□ 0.55
UPK2O00526 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK2O00526 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK2O00526 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.48■□□□□ 0.55
UPK2O00526 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK2O00526 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.48■□□□□ 0.55
UPK2O00526 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPK2O00526 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
UPK2O00526 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.48■□□□□ 0.55
UPK2O00526 AL161729.1-201ENST00000604104 1402 ntBASIC18.48■□□□□ 0.55
UPK2O00526 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPK2O00526 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPK2O00526 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
UPK2O00526 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.47■□□□□ 0.55
UPK2O00526 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK2O00526 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPK2O00526 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
UPK2O00526 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPK2O00526 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.47■□□□□ 0.55
UPK2O00526 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
UPK2O00526 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
UPK2O00526 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPK2O00526 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
UPK2O00526 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.47■□□□□ 0.55
UPK2O00526 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UPK2O00526 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPK2O00526 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.46■□□□□ 0.55
UPK2O00526 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.46■□□□□ 0.55
UPK2O00526 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UPK2O00526 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPK2O00526 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.46■□□□□ 0.55
UPK2O00526 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.46■□□□□ 0.55
UPK2O00526 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.46■□□□□ 0.55
UPK2O00526 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UPK2O00526 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
UPK2O00526 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPK2O00526 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPK2O00526 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPK2O00526 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPK2O00526 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPK2O00526 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.46■□□□□ 0.54
UPK2O00526 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
UPK2O00526 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
UPK2O00526 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.45■□□□□ 0.54
UPK2O00526 AC012676.1-201ENST00000574705 1949 ntBASIC18.45■□□□□ 0.54
UPK2O00526 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPK2O00526 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPK2O00526 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPK2O00526 KRT18P60-201ENST00000312876 1297 ntBASIC18.45■□□□□ 0.54
UPK2O00526 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPK2O00526 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
UPK2O00526 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.45■□□□□ 0.54
UPK2O00526 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.45■□□□□ 0.54
UPK2O00526 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.45■□□□□ 0.54
UPK2O00526 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.45■□□□□ 0.54
UPK2O00526 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
UPK2O00526 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UPK2O00526 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPK2O00526 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPK2O00526 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.45■□□□□ 0.54
UPK2O00526 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.45■□□□□ 0.54
UPK2O00526 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UPK2O00526 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UPK2O00526 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
UPK2O00526 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.44■□□□□ 0.54
UPK2O00526 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms