Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF222A6NCQ9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF222A6NCQ9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF222A6NCQ9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.86■□□□□ 0.61
RNF222A6NCQ9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF222A6NCQ9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF222A6NCQ9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF222A6NCQ9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
RNF222A6NCQ9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RNF222A6NCQ9 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF222A6NCQ9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF222A6NCQ9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF222A6NCQ9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF222A6NCQ9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RNF222A6NCQ9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RNF222A6NCQ9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF222A6NCQ9 AC136428.2-201ENST00000563187 214 ntBASIC18.85■□□□□ 0.61
RNF222A6NCQ9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF222A6NCQ9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF222A6NCQ9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF222A6NCQ9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF222A6NCQ9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF222A6NCQ9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF222A6NCQ9 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF222A6NCQ9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF222A6NCQ9 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF222A6NCQ9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF222A6NCQ9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF222A6NCQ9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF222A6NCQ9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF222A6NCQ9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
RNF222A6NCQ9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF222A6NCQ9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF222A6NCQ9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF222A6NCQ9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF222A6NCQ9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RNF222A6NCQ9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF222A6NCQ9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF222A6NCQ9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF222A6NCQ9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.83■□□□□ 0.61
RNF222A6NCQ9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
RNF222A6NCQ9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RNF222A6NCQ9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF222A6NCQ9 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF222A6NCQ9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RNF222A6NCQ9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.83■□□□□ 0.6
RNF222A6NCQ9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RNF222A6NCQ9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF222A6NCQ9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF222A6NCQ9 AC092068.2-201ENST00000590491 1708 ntBASIC18.83■□□□□ 0.6
RNF222A6NCQ9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RNF222A6NCQ9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF222A6NCQ9 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RNF222A6NCQ9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF222A6NCQ9 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF222A6NCQ9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF222A6NCQ9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF222A6NCQ9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF222A6NCQ9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF222A6NCQ9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF222A6NCQ9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF222A6NCQ9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF222A6NCQ9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RNF222A6NCQ9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.81■□□□□ 0.6
RNF222A6NCQ9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RNF222A6NCQ9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.81■□□□□ 0.6
RNF222A6NCQ9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF222A6NCQ9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF222A6NCQ9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF222A6NCQ9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
RNF222A6NCQ9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF222A6NCQ9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF222A6NCQ9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF222A6NCQ9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RNF222A6NCQ9 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF222A6NCQ9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RNF222A6NCQ9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF222A6NCQ9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF222A6NCQ9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF222A6NCQ9 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF222A6NCQ9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF222A6NCQ9 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF222A6NCQ9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RNF222A6NCQ9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
RNF222A6NCQ9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF222A6NCQ9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RNF222A6NCQ9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RNF222A6NCQ9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF222A6NCQ9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RNF222A6NCQ9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF222A6NCQ9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RNF222A6NCQ9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF222A6NCQ9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF222A6NCQ9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF222A6NCQ9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RNF222A6NCQ9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF222A6NCQ9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RNF222A6NCQ9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF222A6NCQ9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF222A6NCQ9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms