Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.34■□□□□ 0.85
TRDV1A0A1B0GX56 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRDV1A0A1B0GX56 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRDV1A0A1B0GX56 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRDV1A0A1B0GX56 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRDV1A0A1B0GX56 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRDV1A0A1B0GX56 DUX4L11-201ENST00000611504 1267 ntBASIC20.34■□□□□ 0.85
TRDV1A0A1B0GX56 DUX4L12-201ENST00000614593 1267 ntBASIC20.34■□□□□ 0.85
TRDV1A0A1B0GX56 DUX4L14-201ENST00000621227 1267 ntBASIC20.34■□□□□ 0.85
TRDV1A0A1B0GX56 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRDV1A0A1B0GX56 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.34■□□□□ 0.85
TRDV1A0A1B0GX56 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TRDV1A0A1B0GX56 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRDV1A0A1B0GX56 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRDV1A0A1B0GX56 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.34■□□□□ 0.85
TRDV1A0A1B0GX56 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRDV1A0A1B0GX56 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.33■□□□□ 0.85
TRDV1A0A1B0GX56 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRDV1A0A1B0GX56 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.85
TRDV1A0A1B0GX56 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TRDV1A0A1B0GX56 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
TRDV1A0A1B0GX56 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TRDV1A0A1B0GX56 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRDV1A0A1B0GX56 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRDV1A0A1B0GX56 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
TRDV1A0A1B0GX56 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRDV1A0A1B0GX56 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TRDV1A0A1B0GX56 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.33■□□□□ 0.84
TRDV1A0A1B0GX56 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRDV1A0A1B0GX56 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRDV1A0A1B0GX56 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
TRDV1A0A1B0GX56 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRDV1A0A1B0GX56 AC127496.7-201ENST00000625110 1798 ntBASIC20.32■□□□□ 0.84
TRDV1A0A1B0GX56 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.32■□□□□ 0.84
TRDV1A0A1B0GX56 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.32■□□□□ 0.84
TRDV1A0A1B0GX56 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.32■□□□□ 0.84
TRDV1A0A1B0GX56 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRDV1A0A1B0GX56 AC092068.2-201ENST00000590491 1708 ntBASIC20.32■□□□□ 0.84
TRDV1A0A1B0GX56 C1orf229-201ENST00000623686 2258 ntBASIC20.32■□□□□ 0.84
TRDV1A0A1B0GX56 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRDV1A0A1B0GX56 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRDV1A0A1B0GX56 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRDV1A0A1B0GX56 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRDV1A0A1B0GX56 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRDV1A0A1B0GX56 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TRDV1A0A1B0GX56 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRDV1A0A1B0GX56 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRDV1A0A1B0GX56 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRDV1A0A1B0GX56 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TRDV1A0A1B0GX56 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRDV1A0A1B0GX56 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
TRDV1A0A1B0GX56 AC137767.1-201ENST00000602918 1920 ntBASIC20.29■□□□□ 0.84
TRDV1A0A1B0GX56 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.29■□□□□ 0.84
TRDV1A0A1B0GX56 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRDV1A0A1B0GX56 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
TRDV1A0A1B0GX56 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRDV1A0A1B0GX56 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRDV1A0A1B0GX56 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRDV1A0A1B0GX56 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRDV1A0A1B0GX56 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRDV1A0A1B0GX56 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.29■□□□□ 0.84
TRDV1A0A1B0GX56 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TRDV1A0A1B0GX56 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRDV1A0A1B0GX56 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRDV1A0A1B0GX56 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRDV1A0A1B0GX56 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TRDV1A0A1B0GX56 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRDV1A0A1B0GX56 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRDV1A0A1B0GX56 GUSBP5-202ENST00000510805 1989 ntBASIC20.28■□□□□ 0.84
TRDV1A0A1B0GX56 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRDV1A0A1B0GX56 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRDV1A0A1B0GX56 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRDV1A0A1B0GX56 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRDV1A0A1B0GX56 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRDV1A0A1B0GX56 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.28■□□□□ 0.84
TRDV1A0A1B0GX56 AC025884.2-201ENST00000553429 711 ntBASIC20.28■□□□□ 0.84
TRDV1A0A1B0GX56 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.28■□□□□ 0.84
TRDV1A0A1B0GX56 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.28■□□□□ 0.84
TRDV1A0A1B0GX56 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRDV1A0A1B0GX56 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRDV1A0A1B0GX56 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRDV1A0A1B0GX56 ECEL1P1-201ENST00000373592 1742 ntBASIC20.27■□□□□ 0.84
TRDV1A0A1B0GX56 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
TRDV1A0A1B0GX56 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
TRDV1A0A1B0GX56 MIR3960-201ENST00000583311 91 ntBASIC20.27■□□□□ 0.84
TRDV1A0A1B0GX56 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRDV1A0A1B0GX56 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRDV1A0A1B0GX56 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRDV1A0A1B0GX56 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
TRDV1A0A1B0GX56 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRDV1A0A1B0GX56 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRDV1A0A1B0GX56 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRDV1A0A1B0GX56 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRDV1A0A1B0GX56 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.26■□□□□ 0.83
TRDV1A0A1B0GX56 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRDV1A0A1B0GX56 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRDV1A0A1B0GX56 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRDV1A0A1B0GX56 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TRDV1A0A1B0GX56 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRDV1A0A1B0GX56 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms