Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-1A0A0K0K1D8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-1A0A0K0K1D8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-1A0A0K0K1D8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-1A0A0K0K1D8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-1A0A0K0K1D8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV6-1A0A0K0K1D8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRBV6-1A0A0K0K1D8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TRBV6-1A0A0K0K1D8 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TRBV6-1A0A0K0K1D8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV6-1A0A0K0K1D8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRBV6-1A0A0K0K1D8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV6-1A0A0K0K1D8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV6-1A0A0K0K1D8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TRBV6-1A0A0K0K1D8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRBV6-1A0A0K0K1D8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.3■□□□□ 0.36
TRBV6-1A0A0K0K1D8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV6-1A0A0K0K1D8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TRBV6-1A0A0K0K1D8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV6-1A0A0K0K1D8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV6-1A0A0K0K1D8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV6-1A0A0K0K1D8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-1A0A0K0K1D8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-1A0A0K0K1D8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-1A0A0K0K1D8 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TRBV6-1A0A0K0K1D8 LINC00526-201ENST00000581067 1875 ntBASIC17.29■□□□□ 0.36
TRBV6-1A0A0K0K1D8 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.29■□□□□ 0.36
TRBV6-1A0A0K0K1D8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-1A0A0K0K1D8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.29■□□□□ 0.36
TRBV6-1A0A0K0K1D8 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-1A0A0K0K1D8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-1A0A0K0K1D8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.29■□□□□ 0.36
TRBV6-1A0A0K0K1D8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-1A0A0K0K1D8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-1A0A0K0K1D8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.29■□□□□ 0.36
TRBV6-1A0A0K0K1D8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.29■□□□□ 0.36
TRBV6-1A0A0K0K1D8 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.29■□□□□ 0.36
TRBV6-1A0A0K0K1D8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-1A0A0K0K1D8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-1A0A0K0K1D8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV6-1A0A0K0K1D8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV6-1A0A0K0K1D8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.28■□□□□ 0.36
TRBV6-1A0A0K0K1D8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV6-1A0A0K0K1D8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV6-1A0A0K0K1D8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV6-1A0A0K0K1D8 ECEL1P1-201ENST00000373592 1742 ntBASIC17.28■□□□□ 0.36
TRBV6-1A0A0K0K1D8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.28■□□□□ 0.36
TRBV6-1A0A0K0K1D8 AC060814.1-201ENST00000554326 538 ntBASIC17.28■□□□□ 0.36
TRBV6-1A0A0K0K1D8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV6-1A0A0K0K1D8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TRBV6-1A0A0K0K1D8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV6-1A0A0K0K1D8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV6-1A0A0K0K1D8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRBV6-1A0A0K0K1D8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.27■□□□□ 0.36
TRBV6-1A0A0K0K1D8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TRBV6-1A0A0K0K1D8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV6-1A0A0K0K1D8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV6-1A0A0K0K1D8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV6-1A0A0K0K1D8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV6-1A0A0K0K1D8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC17.27■□□□□ 0.36
TRBV6-1A0A0K0K1D8 RP9P-202ENST00000450133 1212 ntBASIC17.27■□□□□ 0.36
TRBV6-1A0A0K0K1D8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.27■□□□□ 0.35
TRBV6-1A0A0K0K1D8 AC137767.1-201ENST00000602918 1920 ntBASIC17.27■□□□□ 0.35
TRBV6-1A0A0K0K1D8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
TRBV6-1A0A0K0K1D8 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-1A0A0K0K1D8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-1A0A0K0K1D8 ZNRF2P2-203ENST00000454624 420 ntBASIC17.26■□□□□ 0.35
TRBV6-1A0A0K0K1D8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-1A0A0K0K1D8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-1A0A0K0K1D8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRBV6-1A0A0K0K1D8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRBV6-1A0A0K0K1D8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
TRBV6-1A0A0K0K1D8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRBV6-1A0A0K0K1D8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-1A0A0K0K1D8 EP400NL-214ENST00000641289 2402 ntBASIC17.25■□□□□ 0.35
TRBV6-1A0A0K0K1D8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-1A0A0K0K1D8 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.25■□□□□ 0.35
TRBV6-1A0A0K0K1D8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TRBV6-1A0A0K0K1D8 AC092296.2-201ENST00000589470 999 ntBASIC17.25■□□□□ 0.35
TRBV6-1A0A0K0K1D8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-1A0A0K0K1D8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-1A0A0K0K1D8 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TRBV6-1A0A0K0K1D8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-1A0A0K0K1D8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-1A0A0K0K1D8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRBV6-1A0A0K0K1D8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV6-1A0A0K0K1D8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-1A0A0K0K1D8 LINC00565-201ENST00000562710 2331 ntBASIC17.25■□□□□ 0.35
TRBV6-1A0A0K0K1D8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.25■□□□□ 0.35
TRBV6-1A0A0K0K1D8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
TRBV6-1A0A0K0K1D8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRBV6-1A0A0K0K1D8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV6-1A0A0K0K1D8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.24■□□□□ 0.35
TRBV6-1A0A0K0K1D8 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV6-1A0A0K0K1D8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV6-1A0A0K0K1D8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV6-1A0A0K0K1D8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
TRBV6-1A0A0K0K1D8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV6-1A0A0K0K1D8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV6-1A0A0K0K1D8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms