Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV27A0A0K0K1C4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TRBV27A0A0K0K1C4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV27A0A0K0K1C4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRBV27A0A0K0K1C4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV27A0A0K0K1C4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV27A0A0K0K1C4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV27A0A0K0K1C4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV27A0A0K0K1C4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV27A0A0K0K1C4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV27A0A0K0K1C4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC16.32■□□□□ 0.2
TRBV27A0A0K0K1C4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV27A0A0K0K1C4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV27A0A0K0K1C4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV27A0A0K0K1C4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV27A0A0K0K1C4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC16.32■□□□□ 0.2
TRBV27A0A0K0K1C4 MIR3648-2-201ENST00000581792 180 ntBASIC16.32■□□□□ 0.2
TRBV27A0A0K0K1C4 MIR3648-1-201ENST00000615959 180 ntBASIC16.32■□□□□ 0.2
TRBV27A0A0K0K1C4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV27A0A0K0K1C4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
TRBV27A0A0K0K1C4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.31■□□□□ 0.2
TRBV27A0A0K0K1C4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRBV27A0A0K0K1C4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC16.31■□□□□ 0.2
TRBV27A0A0K0K1C4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV27A0A0K0K1C4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV27A0A0K0K1C4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV27A0A0K0K1C4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TRBV27A0A0K0K1C4 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TRBV27A0A0K0K1C4 RP9P-202ENST00000450133 1212 ntBASIC16.31■□□□□ 0.2
TRBV27A0A0K0K1C4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV27A0A0K0K1C4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC16.31■□□□□ 0.2
TRBV27A0A0K0K1C4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC16.31■□□□□ 0.2
TRBV27A0A0K0K1C4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV27A0A0K0K1C4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV27A0A0K0K1C4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV27A0A0K0K1C4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV27A0A0K0K1C4 ANOS2P-203ENST00000472227 1816 ntBASIC16.31■□□□□ 0.2
TRBV27A0A0K0K1C4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV27A0A0K0K1C4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC16.3■□□□□ 0.2
TRBV27A0A0K0K1C4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV27A0A0K0K1C4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV27A0A0K0K1C4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV27A0A0K0K1C4 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV27A0A0K0K1C4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.3■□□□□ 0.2
TRBV27A0A0K0K1C4 AC092296.2-201ENST00000589470 999 ntBASIC16.3■□□□□ 0.2
TRBV27A0A0K0K1C4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC16.3■□□□□ 0.2
TRBV27A0A0K0K1C4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC16.3■□□□□ 0.2
TRBV27A0A0K0K1C4 AC092068.2-201ENST00000590491 1708 ntBASIC16.3■□□□□ 0.2
TRBV27A0A0K0K1C4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV27A0A0K0K1C4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC16.3■□□□□ 0.2
TRBV27A0A0K0K1C4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV27A0A0K0K1C4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV27A0A0K0K1C4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV27A0A0K0K1C4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV27A0A0K0K1C4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV27A0A0K0K1C4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRBV27A0A0K0K1C4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV27A0A0K0K1C4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC16.29■□□□□ 0.2
TRBV27A0A0K0K1C4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
TRBV27A0A0K0K1C4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC16.29■□□□□ 0.2
TRBV27A0A0K0K1C4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV27A0A0K0K1C4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC16.29■□□□□ 0.2
TRBV27A0A0K0K1C4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRBV27A0A0K0K1C4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRBV27A0A0K0K1C4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRBV27A0A0K0K1C4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV27A0A0K0K1C4 DUSP8P3-201ENST00000399571 1760 ntBASIC16.28■□□□□ 0.2
TRBV27A0A0K0K1C4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV27A0A0K0K1C4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRBV27A0A0K0K1C4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV27A0A0K0K1C4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV27A0A0K0K1C4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV27A0A0K0K1C4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV27A0A0K0K1C4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV27A0A0K0K1C4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV27A0A0K0K1C4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV27A0A0K0K1C4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV27A0A0K0K1C4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV27A0A0K0K1C4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV27A0A0K0K1C4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV27A0A0K0K1C4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV27A0A0K0K1C4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV27A0A0K0K1C4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRBV27A0A0K0K1C4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC16.28■□□□□ 0.2
TRBV27A0A0K0K1C4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV27A0A0K0K1C4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV27A0A0K0K1C4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC16.27■□□□□ 0.2
TRBV27A0A0K0K1C4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV27A0A0K0K1C4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC16.27■□□□□ 0.2
TRBV27A0A0K0K1C4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV27A0A0K0K1C4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV27A0A0K0K1C4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV27A0A0K0K1C4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV27A0A0K0K1C4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV27A0A0K0K1C4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV27A0A0K0K1C4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV27A0A0K0K1C4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV27A0A0K0K1C4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV27A0A0K0K1C4 ECEL1P2-201ENST00000461596 1295 ntBASIC16.26■□□□□ 0.19
TRBV27A0A0K0K1C4 AC093536.1-201ENST00000569153 554 ntBASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms