Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV26-1A0A087WT03 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV26-1A0A087WT03 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV26-1A0A087WT03 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRAV26-1A0A087WT03 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC16.55■□□□□ 0.24
TRAV26-1A0A087WT03 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRAV26-1A0A087WT03 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV26-1A0A087WT03 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV26-1A0A087WT03 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV26-1A0A087WT03 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRAV26-1A0A087WT03 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRAV26-1A0A087WT03 MIR4508-201ENST00000584178 70 ntBASIC16.54■□□□□ 0.24
TRAV26-1A0A087WT03 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV26-1A0A087WT03 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV26-1A0A087WT03 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV26-1A0A087WT03 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV26-1A0A087WT03 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV26-1A0A087WT03 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV26-1A0A087WT03 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV26-1A0A087WT03 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
TRAV26-1A0A087WT03 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV26-1A0A087WT03 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRAV26-1A0A087WT03 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV26-1A0A087WT03 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV26-1A0A087WT03 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV26-1A0A087WT03 AC103834.1-201ENST00000520383 144 ntBASIC16.53■□□□□ 0.24
TRAV26-1A0A087WT03 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV26-1A0A087WT03 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV26-1A0A087WT03 SLC6A10P-202ENST00000431994 2058 ntBASIC16.53■□□□□ 0.24
TRAV26-1A0A087WT03 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV26-1A0A087WT03 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV26-1A0A087WT03 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TRAV26-1A0A087WT03 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV26-1A0A087WT03 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV26-1A0A087WT03 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV26-1A0A087WT03 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV26-1A0A087WT03 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV26-1A0A087WT03 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRAV26-1A0A087WT03 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV26-1A0A087WT03 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV26-1A0A087WT03 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRAV26-1A0A087WT03 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
TRAV26-1A0A087WT03 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
TRAV26-1A0A087WT03 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV26-1A0A087WT03 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.51■□□□□ 0.23
TRAV26-1A0A087WT03 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV26-1A0A087WT03 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV26-1A0A087WT03 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV26-1A0A087WT03 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC16.51■□□□□ 0.23
TRAV26-1A0A087WT03 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC16.51■□□□□ 0.23
TRAV26-1A0A087WT03 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV26-1A0A087WT03 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRAV26-1A0A087WT03 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV26-1A0A087WT03 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TRAV26-1A0A087WT03 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.5■□□□□ 0.23
TRAV26-1A0A087WT03 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV26-1A0A087WT03 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TRAV26-1A0A087WT03 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.5■□□□□ 0.23
TRAV26-1A0A087WT03 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TRAV26-1A0A087WT03 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV26-1A0A087WT03 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV26-1A0A087WT03 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRAV26-1A0A087WT03 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV26-1A0A087WT03 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV26-1A0A087WT03 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
TRAV26-1A0A087WT03 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV26-1A0A087WT03 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV26-1A0A087WT03 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV26-1A0A087WT03 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV26-1A0A087WT03 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV26-1A0A087WT03 AC020928.2-201ENST00000588717 2197 ntBASIC16.49■□□□□ 0.23
TRAV26-1A0A087WT03 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TRAV26-1A0A087WT03 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV26-1A0A087WT03 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV26-1A0A087WT03 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
TRAV26-1A0A087WT03 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAV26-1A0A087WT03 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAV26-1A0A087WT03 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV26-1A0A087WT03 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV26-1A0A087WT03 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV26-1A0A087WT03 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV26-1A0A087WT03 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV26-1A0A087WT03 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAV26-1A0A087WT03 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TRAV26-1A0A087WT03 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV26-1A0A087WT03 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.48■□□□□ 0.23
TRAV26-1A0A087WT03 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAV26-1A0A087WT03 AC103724.3-201ENST00000564481 992 ntBASIC16.48■□□□□ 0.23
TRAV26-1A0A087WT03 THA1P-201ENST00000590384 1145 ntBASIC16.48■□□□□ 0.23
TRAV26-1A0A087WT03 AL031848.2-201ENST00000607670 837 ntBASIC16.48■□□□□ 0.23
TRAV26-1A0A087WT03 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
TRAV26-1A0A087WT03 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV26-1A0A087WT03 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV26-1A0A087WT03 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.48■□□□□ 0.23
TRAV26-1A0A087WT03 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
TRAV26-1A0A087WT03 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV26-1A0A087WT03 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV26-1A0A087WT03 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
TRAV26-1A0A087WT03 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAV26-1A0A087WT03 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms