Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 RFPL4AP1-201ENST00000530883 850 ntBASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 AC044860.1-202ENST00000559481 777 ntBASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 5S_rRNA.22-201ENST00000614916 106 ntBASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HLA-DRB4X5D2U9 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 AC009090.5-201ENST00000624886 2285 ntBASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 DEK-201ENST00000244776 1441 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 AC067750.1-201ENST00000608826 6545 ntBASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 RPL5P21-201ENST00000404620 815 ntBASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 RAD18-204ENST00000418463 563 ntTSL 4 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 RAD18-205ENST00000421052 582 ntTSL 3 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 TSSK5P-201ENST00000423978 907 ntBASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 AC009477.1-201ENST00000452936 217 ntBASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 AL512638.1-201ENST00000457493 794 ntBASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
HLA-DRB4X5D2U9 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms