Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 AL022328.3-201ENST00000607943 679 ntBASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CSNK1G3Q9Y6M4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 DBET-201ENST00000630918 3363 ntBASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 AC112504.1-201ENST00000623415 1841 ntBASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 AC007787.1-201ENST00000588095 1583 ntBASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 LRRC59-203ENST00000576448 1531 ntBASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 HOMER2P2-201ENST00000451621 847 ntBASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 AC099548.2-209ENST00000480264 625 ntBASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 MIR3615-201ENST00000581999 87 ntBASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 EEF1DP1-201ENST00000585891 896 ntBASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 AL603764.1-201ENST00000636452 321 ntBASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.99□□□□□ -0.01
CSNK1G3Q9Y6M4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CSNK1G3Q9Y6M4 AC148477.4-201ENST00000613430 1793 ntBASIC14.98□□□□□ -0.01
CSNK1G3Q9Y6M4 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1G3Q9Y6M4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.98□□□□□ -0.01
CSNK1G3Q9Y6M4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1G3Q9Y6M4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.98□□□□□ -0.01
CSNK1G3Q9Y6M4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1G3Q9Y6M4 PRAL-201ENST00000624952 3286 ntBASIC14.98□□□□□ -0.01
CSNK1G3Q9Y6M4 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.98□□□□□ -0.01
CSNK1G3Q9Y6M4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1G3Q9Y6M4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1G3Q9Y6M4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.98□□□□□ -0.01
CSNK1G3Q9Y6M4 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1G3Q9Y6M4 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CSNK1G3Q9Y6M4 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CSNK1G3Q9Y6M4 RPL5P21-201ENST00000404620 815 ntBASIC14.98□□□□□ -0.01
CSNK1G3Q9Y6M4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.98□□□□□ -0.01
CSNK1G3Q9Y6M4 BCYRN1-201ENST00000418539 200 ntBASIC14.98□□□□□ -0.01
CSNK1G3Q9Y6M4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.98□□□□□ -0.01
CSNK1G3Q9Y6M4 AL591846.1-201ENST00000451736 433 ntBASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms