Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PCDHGA11Q9Y5H2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 AC000095.1-201ENST00000603208 874 ntBASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 GPALPP1-207ENST00000611650 899 ntBASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 AL390754.1-201ENST00000619088 582 ntBASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 AC005786.4-201ENST00000623369 682 ntBASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDHGA11Q9Y5H2 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 ZBED1P1-201ENST00000502364 1930 ntBASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 AL512638.1-201ENST00000457493 794 ntBASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 MEIS3P1-201ENST00000495167 958 ntBASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 AC009407.1-201ENST00000568958 598 ntBASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 AC093512.1-201ENST00000617969 520 ntBASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PCDHGA11Q9Y5H2 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms