Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 SLC25A47P1-201ENST00000531577 414 ntBASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 AL583810.1-201ENST00000553344 1045 ntBASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 AL391069.4-201ENST00000609583 481 ntBASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 AC093525.8-201ENST00000624099 1342 ntBASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 LINC00554-201ENST00000564841 3011 ntBASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 CICP11-201ENST00000434745 2827 ntBASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDHB1Q9Y5F3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.33■□□□□ 0.05
PCDHB1Q9Y5F3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHB1Q9Y5F3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
PCDHB1Q9Y5F3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHB1Q9Y5F3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHB1Q9Y5F3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHB1Q9Y5F3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHB1Q9Y5F3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
PCDHB1Q9Y5F3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.33■□□□□ 0.05
PCDHB1Q9Y5F3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHB1Q9Y5F3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDHB1Q9Y5F3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 TCAF2P1-201ENST00000291129 2421 ntBASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 MIR1908-201ENST00000410394 80 ntBASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 RN7SL399P-201ENST00000471648 279 ntBASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 MIR6787-201ENST00000616675 61 ntBASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
PCDHB1Q9Y5F3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHB1Q9Y5F3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms