Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC23.31■■□□□ 1.32
RIMBP3Q9UFD9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RIMBP3Q9UFD9 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RIMBP3Q9UFD9 AC138761.6-201ENST00000583997 1423 ntBASIC23.31■■□□□ 1.32
RIMBP3Q9UFD9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RIMBP3Q9UFD9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC23.31■■□□□ 1.32
RIMBP3Q9UFD9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
RIMBP3Q9UFD9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 IFNL3P1-201ENST00000595082 501 ntBASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 RPL4P6-201ENST00000438116 1304 ntBASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 JTB-202ENST00000356648 1040 ntTSL 2 BASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 GCOM2-201ENST00000509133 1104 ntBASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RIMBP3Q9UFD9 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC23.29■■□□□ 1.32
RIMBP3Q9UFD9 AC018695.7-201ENST00000624587 2492 ntBASIC23.29■■□□□ 1.32
RIMBP3Q9UFD9 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC23.29■■□□□ 1.32
RIMBP3Q9UFD9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
RIMBP3Q9UFD9 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC23.29■■□□□ 1.32
RIMBP3Q9UFD9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
RIMBP3Q9UFD9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC23.29■■□□□ 1.32
RIMBP3Q9UFD9 RNF216P1-203ENST00000404404 2427 ntBASIC23.29■■□□□ 1.32
RIMBP3Q9UFD9 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC23.29■■□□□ 1.32
RIMBP3Q9UFD9 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RIMBP3Q9UFD9 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RIMBP3Q9UFD9 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RIMBP3Q9UFD9 TLE1P1-201ENST00000422965 589 ntBASIC23.29■■□□□ 1.32
RIMBP3Q9UFD9 HNRNPA3P6-201ENST00000472163 1006 ntBASIC23.29■■□□□ 1.32
RIMBP3Q9UFD9 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC23.29■■□□□ 1.32
RIMBP3Q9UFD9 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RIMBP3Q9UFD9 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RIMBP3Q9UFD9 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RIMBP3Q9UFD9 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC23.29■■□□□ 1.32
RIMBP3Q9UFD9 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC23.29■■□□□ 1.32
RIMBP3Q9UFD9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RIMBP3Q9UFD9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC23.28■■□□□ 1.32
RIMBP3Q9UFD9 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
RIMBP3Q9UFD9 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RIMBP3Q9UFD9 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RIMBP3Q9UFD9 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC23.28■■□□□ 1.32
RIMBP3Q9UFD9 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC23.28■■□□□ 1.32
RIMBP3Q9UFD9 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
RIMBP3Q9UFD9 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RIMBP3Q9UFD9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC23.28■■□□□ 1.32
RIMBP3Q9UFD9 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC23.28■■□□□ 1.32
RIMBP3Q9UFD9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RIMBP3Q9UFD9 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RIMBP3Q9UFD9 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC23.28■■□□□ 1.32
RIMBP3Q9UFD9 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC23.28■■□□□ 1.32
RIMBP3Q9UFD9 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RIMBP3Q9UFD9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC23.28■■□□□ 1.32
RIMBP3Q9UFD9 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RIMBP3Q9UFD9 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RIMBP3Q9UFD9 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RIMBP3Q9UFD9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RIMBP3Q9UFD9 PES1-204ENST00000402284 2144 ntTSL 5 BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 KRT18P44-201ENST00000416086 1285 ntBASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 ABCC6P2-201ENST00000526069 590 ntBASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 ABCC6P1-203ENST00000565566 1170 ntBASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 EMP3-204ENST00000596315 761 ntTSL 2 BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 URAHP-205ENST00000610227 398 ntBASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 ALOX12P2-203ENST00000570921 1945 ntBASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC23.27■■□□□ 1.32
RIMBP3Q9UFD9 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms