Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 CETN4P-206ENST00000642099 2168 ntBASIC15.13■□□□□ 0.01
MKS1Q9NXB0 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MKS1Q9NXB0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 AL589739.1-201ENST00000607720 493 ntBASIC15.12■□□□□ 0.01
MKS1Q9NXB0 AC009093.7-201ENST00000623853 1223 ntBASIC15.12■□□□□ 0.01
MKS1Q9NXB0 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MKS1Q9NXB0 MST1P2-201ENST00000457982 2291 ntBASIC15.12■□□□□ 0.01
MKS1Q9NXB0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 AC004461.1-201ENST00000412461 403 ntBASIC15.11■□□□□ 0.01
MKS1Q9NXB0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.11■□□□□ 0.01
MKS1Q9NXB0 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
MKS1Q9NXB0 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms