Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 NUS1P3-201ENST00000423502 862 ntBASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 AC133539.2-201ENST00000604757 467 ntBASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 AC007431.3-201ENST00000623221 587 ntBASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 AC093525.8-201ENST00000624099 1342 ntBASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBQLN4Q9NRR5 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 SOCS2P1-201ENST00000417727 557 ntBASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 AC140912.1-201ENST00000577171 1054 ntBASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
UBQLN4Q9NRR5 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 REXO1L2P-201ENST00000425429 2069 ntBASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 AC098850.1-201ENST00000419919 790 ntBASIC14.1□□□□□ -0.15
UBQLN4Q9NRR5 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms