Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 FAM8A4P-201ENST00000435433 1213 ntBASIC17.8■□□□□ 0.44
SH2D4AQ9H788 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 CNN2P10-201ENST00000443067 918 ntBASIC17.8■□□□□ 0.44
SH2D4AQ9H788 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 AC244093.1-201ENST00000610837 814 ntBASIC17.8■□□□□ 0.44
SH2D4AQ9H788 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 AC015818.8-201ENST00000587907 1519 ntBASIC17.8■□□□□ 0.44
SH2D4AQ9H788 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 CICP13-201ENST00000422015 2789 ntBASIC17.8■□□□□ 0.44
SH2D4AQ9H788 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.8■□□□□ 0.44
SH2D4AQ9H788 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.8■□□□□ 0.44
SH2D4AQ9H788 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 AC006033.1-201ENST00000440505 426 ntBASIC17.79■□□□□ 0.44
SH2D4AQ9H788 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 AC099548.2-209ENST00000480264 625 ntBASIC17.79■□□□□ 0.44
SH2D4AQ9H788 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 C2orf69P2-201ENST00000562032 1123 ntBASIC17.79■□□□□ 0.44
SH2D4AQ9H788 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SH2D4AQ9H788 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SH2D4AQ9H788 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms