Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 AL157414.3-201ENST00000624276 1954 ntBASIC18.03■□□□□ 0.48
RNF41Q9H4P4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 BCRP2-202ENST00000447763 634 ntBASIC18.03■□□□□ 0.48
RNF41Q9H4P4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 AC106760.1-201ENST00000508690 800 ntBASIC18.03■□□□□ 0.48
RNF41Q9H4P4 BCRP6-201ENST00000510112 632 ntBASIC18.03■□□□□ 0.48
RNF41Q9H4P4 BCRP7-201ENST00000511549 544 ntBASIC18.03■□□□□ 0.48
RNF41Q9H4P4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RNF41Q9H4P4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF41Q9H4P4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
RNF41Q9H4P4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
RNF41Q9H4P4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF41Q9H4P4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF41Q9H4P4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF41Q9H4P4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF41Q9H4P4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF41Q9H4P4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF41Q9H4P4 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
RNF41Q9H4P4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF41Q9H4P4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF41Q9H4P4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
RNF41Q9H4P4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF41Q9H4P4 AC092933.1-201ENST00000393644 945 ntBASIC18.02■□□□□ 0.48
RNF41Q9H4P4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RNF41Q9H4P4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF41Q9H4P4 U91328.1-201ENST00000437528 223 ntBASIC18.02■□□□□ 0.48
RNF41Q9H4P4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF41Q9H4P4 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.02■□□□□ 0.48
RNF41Q9H4P4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
RNF41Q9H4P4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF41Q9H4P4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.02■□□□□ 0.48
RNF41Q9H4P4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RNF41Q9H4P4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RNF41Q9H4P4 AC145423.3-201ENST00000615987 467 ntBASIC18.02■□□□□ 0.48
RNF41Q9H4P4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF41Q9H4P4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF41Q9H4P4 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF41Q9H4P4 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF41Q9H4P4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RNF41Q9H4P4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
RNF41Q9H4P4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RNF41Q9H4P4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
RNF41Q9H4P4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 BOLA2P3-201ENST00000404566 256 ntBASIC18.01■□□□□ 0.47
RNF41Q9H4P4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 DUX4L47-201ENST00000566374 394 ntBASIC18.01■□□□□ 0.47
RNF41Q9H4P4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RNF41Q9H4P4 AL359258.3-201ENST00000622910 2331 ntBASIC18.01■□□□□ 0.47
RNF41Q9H4P4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms