Protein–RNA interactions for Protein: Q9C0G0

ZNF407, Zinc finger protein 407, humanhuman

Predictions only

Length 2,248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF407Q9C0G0 KRT8P44-201ENST00000441609 1350 ntBASIC13.74□□□□□ -0.21
ZNF407Q9C0G0 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
ZNF407Q9C0G0 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
ZNF407Q9C0G0 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF407Q9C0G0 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.74□□□□□ -0.21
ZNF407Q9C0G0 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
ZNF407Q9C0G0 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.74□□□□□ -0.21
ZNF407Q9C0G0 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
ZNF407Q9C0G0 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
ZNF407Q9C0G0 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.74□□□□□ -0.21
ZNF407Q9C0G0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.74□□□□□ -0.21
ZNF407Q9C0G0 AC132938.4-201ENST00000623835 848 ntBASIC13.74□□□□□ -0.21
ZNF407Q9C0G0 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
ZNF407Q9C0G0 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.74□□□□□ -0.21
ZNF407Q9C0G0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 FAM197Y7-201ENST00000432892 766 ntBASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 GOLGA2P4-201ENST00000441462 777 ntBASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 PFN1P12-201ENST00000455938 534 ntBASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 REXO1L5P-201ENST00000622260 2098 ntBASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 AC105917.1-201ENST00000506637 2539 ntBASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.73□□□□□ -0.21
ZNF407Q9C0G0 AL596257.1-201ENST00000641463 2694 ntBASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 HSPB1P2-201ENST00000448722 546 ntBASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 AC005730.2-201ENST00000564549 1184 ntBASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 PPY2P-201ENST00000582808 702 ntBASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.72□□□□□ -0.21
ZNF407Q9C0G0 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms