Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 TSPY16P-201ENST00000449843 468 ntBASIC14.17□□□□□ -0.14
TRIM2Q9C040 AL512638.1-201ENST00000457493 794 ntBASIC14.17□□□□□ -0.14
TRIM2Q9C040 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM2Q9C040 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM2Q9C040 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM2Q9C040 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM2Q9C040 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM2Q9C040 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM2Q9C040 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM2Q9C040 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM2Q9C040 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM2Q9C040 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM2Q9C040 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRIM2Q9C040 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRIM2Q9C040 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM2Q9C040 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM2Q9C040 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM2Q9C040 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM2Q9C040 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM2Q9C040 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM2Q9C040 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM2Q9C040 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM2Q9C040 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM2Q9C040 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM2Q9C040 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM2Q9C040 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM2Q9C040 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.16□□□□□ -0.14
TRIM2Q9C040 UGT1A2P-201ENST00000454886 866 ntBASIC14.16□□□□□ -0.14
TRIM2Q9C040 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.16□□□□□ -0.14
TRIM2Q9C040 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM2Q9C040 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM2Q9C040 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM2Q9C040 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 AC012508.2-201ENST00000567613 1472 ntBASIC14.16□□□□□ -0.14
TRIM2Q9C040 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM2Q9C040 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM2Q9C040 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM2Q9C040 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM2Q9C040 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM2Q9C040 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM2Q9C040 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 LINC02228-204ENST00000642115 2962 ntBASIC14.16□□□□□ -0.14
TRIM2Q9C040 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM2Q9C040 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TRIM2Q9C040 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRIM2Q9C040 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRIM2Q9C040 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM2Q9C040 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM2Q9C040 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM2Q9C040 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
TRIM2Q9C040 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM2Q9C040 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRIM2Q9C040 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM2Q9C040 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRIM2Q9C040 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRIM2Q9C040 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRIM2Q9C040 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM2Q9C040 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM2Q9C040 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRIM2Q9C040 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM2Q9C040 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRIM2Q9C040 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms