Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 KRT17P4-201ENST00000429445 819 ntBASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 ENPP7P8-202ENST00000527856 1345 ntBASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 AC008741.2-201ENST00000612792 3115 ntBASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CNTNAP3Q9BZ76 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 LINC02199-201ENST00000506655 2702 ntBASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 Z69890.1-201ENST00000382990 339 ntBASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 AP003171.2-201ENST00000528208 925 ntBASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 RN7SL48P-201ENST00000579283 293 ntBASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
CNTNAP3Q9BZ76 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.56□□□□□ -0.08
CNTNAP3Q9BZ76 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CNTNAP3Q9BZ76 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CNTNAP3Q9BZ76 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 339 ms