Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 HAUS4P1-201ENST00000406739 1145 ntBASIC17.47■□□□□ 0.39
CCDC94Q9BW85 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 ZNF890P-202ENST00000530367 1156 ntBASIC17.47■□□□□ 0.39
CCDC94Q9BW85 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 AC009407.1-201ENST00000568958 598 ntBASIC17.47■□□□□ 0.39
CCDC94Q9BW85 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 AC138761.1-201ENST00000584393 385 ntBASIC17.47■□□□□ 0.39
CCDC94Q9BW85 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.47■□□□□ 0.39
CCDC94Q9BW85 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCDC94Q9BW85 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 MIR661-201ENST00000384842 89 ntBASIC17.46■□□□□ 0.39
CCDC94Q9BW85 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 FO393414.2-201ENST00000405153 598 ntBASIC17.46■□□□□ 0.39
CCDC94Q9BW85 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC94Q9BW85 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
CCDC94Q9BW85 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC94Q9BW85 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC94Q9BW85 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC94Q9BW85 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC94Q9BW85 LINC01230-201ENST00000625222 3017 ntBASIC17.45■□□□□ 0.38
CCDC94Q9BW85 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC94Q9BW85 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC94Q9BW85 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC94Q9BW85 BTBD7P1-201ENST00000447253 1453 ntBASIC17.45■□□□□ 0.38
CCDC94Q9BW85 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC94Q9BW85 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC94Q9BW85 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC94Q9BW85 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC94Q9BW85 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC94Q9BW85 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC94Q9BW85 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC94Q9BW85 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC94Q9BW85 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CCDC94Q9BW85 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC94Q9BW85 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms