Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.81□□□□□ -0.2
TRAF4Q9BUZ4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF4Q9BUZ4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF4Q9BUZ4 AL391825.1-201ENST00000457671 1364 ntBASIC13.81□□□□□ -0.2
TRAF4Q9BUZ4 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF4Q9BUZ4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF4Q9BUZ4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF4Q9BUZ4 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF4Q9BUZ4 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TRAF4Q9BUZ4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAF4Q9BUZ4 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 AC092127.1-201ENST00000567093 3455 ntBASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 SPDYE19P-201ENST00000338590 713 ntBASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 AC087499.6-201ENST00000411576 835 ntBASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 AC093004.1-201ENST00000508850 424 ntBASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 SDHAP3-202ENST00000515467 728 ntBASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 COL6A4P2-202ENST00000504443 2753 ntBASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 AC140479.7-201ENST00000636301 2332 ntBASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.8□□□□□ -0.2
TRAF4Q9BUZ4 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 LINC01144-201ENST00000626198 1710 ntBASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 AC098614.1-201ENST00000368528 745 ntBASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 MIR6069-201ENST00000620069 79 ntBASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.79□□□□□ -0.2
TRAF4Q9BUZ4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRAF4Q9BUZ4 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms