Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VRK1Q99986 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
VRK1Q99986 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VRK1Q99986 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
VRK1Q99986 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.65□□□□□ -0.22
VRK1Q99986 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
VRK1Q99986 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
VRK1Q99986 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
VRK1Q99986 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.65□□□□□ -0.22
VRK1Q99986 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
VRK1Q99986 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.23
VRK1Q99986 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.64□□□□□ -0.23
VRK1Q99986 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
VRK1Q99986 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.64□□□□□ -0.23
VRK1Q99986 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.64□□□□□ -0.23
VRK1Q99986 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.64□□□□□ -0.23
VRK1Q99986 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
VRK1Q99986 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.64□□□□□ -0.23
VRK1Q99986 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
VRK1Q99986 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.64□□□□□ -0.23
VRK1Q99986 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.64□□□□□ -0.23
VRK1Q99986 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.64□□□□□ -0.23
VRK1Q99986 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.64□□□□□ -0.23
VRK1Q99986 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.64□□□□□ -0.23
VRK1Q99986 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.64□□□□□ -0.23
VRK1Q99986 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 TPRX2P-201ENST00000535362 881 ntBASIC13.64□□□□□ -0.23
VRK1Q99986 TIMM17BP1-201ENST00000545713 516 ntBASIC13.64□□□□□ -0.23
VRK1Q99986 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.64□□□□□ -0.23
VRK1Q99986 AC140912.1-201ENST00000577171 1054 ntBASIC13.64□□□□□ -0.23
VRK1Q99986 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.64□□□□□ -0.23
VRK1Q99986 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
VRK1Q99986 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
VRK1Q99986 AC004461.2-201ENST00000629517 803 ntBASIC13.64□□□□□ -0.23
VRK1Q99986 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
VRK1Q99986 CICP23-201ENST00000605013 2741 ntBASIC13.64□□□□□ -0.23
VRK1Q99986 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
VRK1Q99986 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.64□□□□□ -0.23
VRK1Q99986 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.64□□□□□ -0.23
VRK1Q99986 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.64□□□□□ -0.23
VRK1Q99986 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.64□□□□□ -0.23
VRK1Q99986 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
VRK1Q99986 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.64□□□□□ -0.23
VRK1Q99986 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.64□□□□□ -0.23
VRK1Q99986 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
VRK1Q99986 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.64□□□□□ -0.23
VRK1Q99986 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.64□□□□□ -0.23
VRK1Q99986 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.64□□□□□ -0.23
VRK1Q99986 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
VRK1Q99986 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
VRK1Q99986 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
VRK1Q99986 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VRK1Q99986 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK1Q99986 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
VRK1Q99986 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK1Q99986 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK1Q99986 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK1Q99986 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
VRK1Q99986 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK1Q99986 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.63□□□□□ -0.23
VRK1Q99986 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
VRK1Q99986 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.63□□□□□ -0.23
VRK1Q99986 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.63□□□□□ -0.23
VRK1Q99986 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms