Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARID3AQ99856 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARID3AQ99856 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
ARID3AQ99856 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARID3AQ99856 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
ARID3AQ99856 AC112504.1-201ENST00000623415 1841 ntBASIC17.61■□□□□ 0.41
ARID3AQ99856 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARID3AQ99856 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARID3AQ99856 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ARID3AQ99856 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ARID3AQ99856 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARID3AQ99856 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARID3AQ99856 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.61■□□□□ 0.41
ARID3AQ99856 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARID3AQ99856 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARID3AQ99856 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARID3AQ99856 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARID3AQ99856 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARID3AQ99856 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARID3AQ99856 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.61■□□□□ 0.41
ARID3AQ99856 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.61■□□□□ 0.41
ARID3AQ99856 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ARID3AQ99856 YBX1P5-201ENST00000509441 847 ntBASIC17.61■□□□□ 0.41
ARID3AQ99856 MIR3687-2-201ENST00000577708 61 ntBASIC17.61■□□□□ 0.41
ARID3AQ99856 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.61■□□□□ 0.41
ARID3AQ99856 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.61■□□□□ 0.41
ARID3AQ99856 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARID3AQ99856 MIR3687-1-201ENST00000614492 61 ntBASIC17.61■□□□□ 0.41
ARID3AQ99856 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
ARID3AQ99856 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
ARID3AQ99856 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARID3AQ99856 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ARID3AQ99856 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ARID3AQ99856 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.61■□□□□ 0.41
ARID3AQ99856 FOXO1B-201ENST00000504678 1527 ntBASIC17.61■□□□□ 0.41
ARID3AQ99856 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ARID3AQ99856 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
ARID3AQ99856 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.61■□□□□ 0.41
ARID3AQ99856 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
ARID3AQ99856 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARID3AQ99856 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.61■□□□□ 0.41
ARID3AQ99856 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ARID3AQ99856 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ARID3AQ99856 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ARID3AQ99856 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ARID3AQ99856 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ARID3AQ99856 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
ARID3AQ99856 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ARID3AQ99856 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ARID3AQ99856 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.6■□□□□ 0.41
ARID3AQ99856 CEND1P1-201ENST00000451006 455 ntBASIC17.6■□□□□ 0.41
ARID3AQ99856 TIMM8BP1-201ENST00000452384 211 ntBASIC17.6■□□□□ 0.41
ARID3AQ99856 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.6■□□□□ 0.41
ARID3AQ99856 PRYP6-201ENST00000514804 343 ntBASIC17.6■□□□□ 0.41
ARID3AQ99856 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.6■□□□□ 0.41
ARID3AQ99856 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.6■□□□□ 0.41
ARID3AQ99856 AKAP8P1-201ENST00000434743 1349 ntBASIC17.6■□□□□ 0.41
ARID3AQ99856 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.6■□□□□ 0.41
ARID3AQ99856 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC17.6■□□□□ 0.41
ARID3AQ99856 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.6■□□□□ 0.41
ARID3AQ99856 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ARID3AQ99856 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
ARID3AQ99856 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ARID3AQ99856 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ARID3AQ99856 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
ARID3AQ99856 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC17.6■□□□□ 0.41
ARID3AQ99856 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ARID3AQ99856 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.6■□□□□ 0.41
ARID3AQ99856 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
ARID3AQ99856 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ARID3AQ99856 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
ARID3AQ99856 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC17.6■□□□□ 0.41
ARID3AQ99856 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.6■□□□□ 0.41
ARID3AQ99856 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ARID3AQ99856 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
ARID3AQ99856 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ARID3AQ99856 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ARID3AQ99856 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ARID3AQ99856 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ARID3AQ99856 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ARID3AQ99856 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ARID3AQ99856 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ARID3AQ99856 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC17.59■□□□□ 0.41
ARID3AQ99856 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.59■□□□□ 0.41
ARID3AQ99856 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ARID3AQ99856 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ARID3AQ99856 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.59■□□□□ 0.41
ARID3AQ99856 LINC01101-201ENST00000622953 1884 ntBASIC17.59■□□□□ 0.41
ARID3AQ99856 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ARID3AQ99856 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ARID3AQ99856 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC17.59■□□□□ 0.41
ARID3AQ99856 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ARID3AQ99856 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.59■□□□□ 0.41
ARID3AQ99856 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.59■□□□□ 0.41
ARID3AQ99856 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ARID3AQ99856 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.59■□□□□ 0.41
ARID3AQ99856 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ARID3AQ99856 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ARID3AQ99856 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ARID3AQ99856 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms