Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
GFI1Q99684 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GFI1Q99684 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
GFI1Q99684 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
GFI1Q99684 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
GFI1Q99684 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GFI1Q99684 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GFI1Q99684 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GFI1Q99684 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.21□□□□□ -0.29
GFI1Q99684 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
GFI1Q99684 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
GFI1Q99684 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
GFI1Q99684 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
GFI1Q99684 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GFI1Q99684 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
GFI1Q99684 RPL13P2-201ENST00000440687 659 ntBASIC13.21□□□□□ -0.29
GFI1Q99684 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
GFI1Q99684 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.29
GFI1Q99684 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.21□□□□□ -0.29
GFI1Q99684 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.21□□□□□ -0.29
GFI1Q99684 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.21□□□□□ -0.29
GFI1Q99684 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GFI1Q99684 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
GFI1Q99684 AC027601.4-201ENST00000611259 610 ntBASIC13.21□□□□□ -0.29
GFI1Q99684 AL121723.1-201ENST00000445194 1519 ntBASIC13.21□□□□□ -0.29
GFI1Q99684 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GFI1Q99684 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
GFI1Q99684 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
GFI1Q99684 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
GFI1Q99684 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GFI1Q99684 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.21□□□□□ -0.3
GFI1Q99684 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GFI1Q99684 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GFI1Q99684 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
GFI1Q99684 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
GFI1Q99684 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.21□□□□□ -0.3
GFI1Q99684 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GFI1Q99684 AC105206.1-202ENST00000314927 2368 ntBASIC13.21□□□□□ -0.3
GFI1Q99684 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GFI1Q99684 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
GFI1Q99684 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
GFI1Q99684 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.2□□□□□ -0.3
GFI1Q99684 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
GFI1Q99684 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
GFI1Q99684 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.2□□□□□ -0.3
GFI1Q99684 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.2□□□□□ -0.3
GFI1Q99684 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 AL157414.3-201ENST00000624276 1954 ntBASIC13.2□□□□□ -0.3
GFI1Q99684 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
GFI1Q99684 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
GFI1Q99684 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.2□□□□□ -0.3
GFI1Q99684 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 YBX2P1-201ENST00000394192 760 ntBASIC13.2□□□□□ -0.3
GFI1Q99684 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.2□□□□□ -0.3
GFI1Q99684 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.2□□□□□ -0.3
GFI1Q99684 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.2□□□□□ -0.3
GFI1Q99684 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.2□□□□□ -0.3
GFI1Q99684 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.2□□□□□ -0.3
GFI1Q99684 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.2□□□□□ -0.3
GFI1Q99684 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.2□□□□□ -0.3
GFI1Q99684 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.2□□□□□ -0.3
GFI1Q99684 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.2□□□□□ -0.3
GFI1Q99684 AC025048.3-201ENST00000590609 569 ntBASIC13.2□□□□□ -0.3
GFI1Q99684 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
GFI1Q99684 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 FAM197Y3-203ENST00000618346 717 ntBASIC13.2□□□□□ -0.3
GFI1Q99684 AC005702.4-201ENST00000618393 416 ntBASIC13.2□□□□□ -0.3
GFI1Q99684 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.2□□□□□ -0.3
GFI1Q99684 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.2□□□□□ -0.3
GFI1Q99684 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.2□□□□□ -0.3
GFI1Q99684 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.2□□□□□ -0.3
GFI1Q99684 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
GFI1Q99684 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.2□□□□□ -0.3
GFI1Q99684 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.2□□□□□ -0.3
GFI1Q99684 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GFI1Q99684 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.2□□□□□ -0.3
GFI1Q99684 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.2□□□□□ -0.3
GFI1Q99684 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms