Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CDCA3Q99618 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
CDCA3Q99618 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CDCA3Q99618 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.7■□□□□ 0.1
CDCA3Q99618 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CDCA3Q99618 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 AC020910.5-201ENST00000623668 1865 ntBASIC15.7■□□□□ 0.1
CDCA3Q99618 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.7■□□□□ 0.1
CDCA3Q99618 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC15.7■□□□□ 0.1
CDCA3Q99618 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC15.7■□□□□ 0.1
CDCA3Q99618 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.7■□□□□ 0.1
CDCA3Q99618 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.7■□□□□ 0.1
CDCA3Q99618 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.7■□□□□ 0.1
CDCA3Q99618 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.7■□□□□ 0.1
CDCA3Q99618 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
CDCA3Q99618 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CDCA3Q99618 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.7■□□□□ 0.1
CDCA3Q99618 AC012508.2-201ENST00000567613 1472 ntBASIC15.7■□□□□ 0.1
CDCA3Q99618 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CDCA3Q99618 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.7■□□□□ 0.1
CDCA3Q99618 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.7■□□□□ 0.1
CDCA3Q99618 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDCA3Q99618 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.69■□□□□ 0.1
CDCA3Q99618 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDCA3Q99618 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CDCA3Q99618 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDCA3Q99618 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDCA3Q99618 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.69■□□□□ 0.1
CDCA3Q99618 MST1L-201ENST00000442552 2185 ntBASIC15.69■□□□□ 0.1
CDCA3Q99618 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.69■□□□□ 0.1
CDCA3Q99618 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CDCA3Q99618 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDCA3Q99618 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.69■□□□□ 0.1
CDCA3Q99618 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CDCA3Q99618 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.69■□□□□ 0.1
CDCA3Q99618 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDCA3Q99618 PCDHA12-202ENST00000613593 2588 ntBASIC15.69■□□□□ 0.1
CDCA3Q99618 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDCA3Q99618 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDCA3Q99618 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDCA3Q99618 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDCA3Q99618 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.69■□□□□ 0.1
CDCA3Q99618 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.69■□□□□ 0.1
CDCA3Q99618 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDCA3Q99618 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.69■□□□□ 0.1
CDCA3Q99618 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDCA3Q99618 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.69■□□□□ 0.1
CDCA3Q99618 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.69■□□□□ 0.1
CDCA3Q99618 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDCA3Q99618 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDCA3Q99618 AC026320.2-201ENST00000434379 478 ntBASIC15.69■□□□□ 0.1
CDCA3Q99618 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC15.69■□□□□ 0.1
CDCA3Q99618 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.69■□□□□ 0.1
CDCA3Q99618 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.69■□□□□ 0.1
CDCA3Q99618 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.69■□□□□ 0.1
CDCA3Q99618 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDCA3Q99618 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.69■□□□□ 0.1
CDCA3Q99618 MIR6769A-201ENST00000617340 73 ntBASIC15.69■□□□□ 0.1
CDCA3Q99618 AC242376.2-201ENST00000619355 883 ntBASIC15.69■□□□□ 0.1
CDCA3Q99618 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDCA3Q99618 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDCA3Q99618 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDCA3Q99618 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CDCA3Q99618 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDCA3Q99618 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CDCA3Q99618 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDCA3Q99618 AC011270.2-201ENST00000624293 2550 ntBASIC15.69■□□□□ 0.1
CDCA3Q99618 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDCA3Q99618 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.68■□□□□ 0.1
CDCA3Q99618 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDCA3Q99618 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.68■□□□□ 0.1
CDCA3Q99618 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDCA3Q99618 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDCA3Q99618 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDCA3Q99618 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDCA3Q99618 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CDCA3Q99618 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms