Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 SSR4P1-203ENST00000599569 2260 ntBASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CDK5RAP1Q96SZ6 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 AC006001.1-201ENST00000325130 474 ntBASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 FAM21FP-201ENST00000426241 1131 ntBASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 RPS2P32-201ENST00000439199 892 ntBASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 ENPP7P14-201ENST00000621765 1040 ntBASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 AC138951.2-201ENST00000623455 1161 ntBASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 AC008687.7-202ENST00000637404 953 ntBASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 REXO1L4P-201ENST00000605109 1937 ntBASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 WASH3P-207ENST00000560956 1394 ntBASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CDK5RAP1Q96SZ6 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 AC112693.3-201ENST00000624819 1983 ntBASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 C18orf15-201ENST00000623680 2534 ntBASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 HLA-K-203ENST00000430151 1046 ntBASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 AC245100.3-201ENST00000441281 285 ntBASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 YBX1P6-201ENST00000442962 1002 ntBASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 DUX4L47-201ENST00000566374 394 ntBASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CDK5RAP1Q96SZ6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms