Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNX18Q96RF0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.07□□□□□ -0.16
SNX18Q96RF0 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SNX18Q96RF0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 AC148477.4-201ENST00000613430 1793 ntBASIC14.06□□□□□ -0.16
SNX18Q96RF0 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 AC136759.1-202ENST00000530858 2194 ntBASIC14.06□□□□□ -0.16
SNX18Q96RF0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 AL607033.1-201ENST00000623900 1599 ntBASIC14.06□□□□□ -0.16
SNX18Q96RF0 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 FAM8A3P-201ENST00000427218 844 ntBASIC14.06□□□□□ -0.16
SNX18Q96RF0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 MIR3197-201ENST00000582241 73 ntBASIC14.06□□□□□ -0.16
SNX18Q96RF0 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 AC007967.4-201ENST00000614700 386 ntBASIC14.06□□□□□ -0.16
SNX18Q96RF0 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
SNX18Q96RF0 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SNX18Q96RF0 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 AC091951.1-201ENST00000512854 2465 ntBASIC14.05□□□□□ -0.16
SNX18Q96RF0 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 AC099521.3-201ENST00000624251 2938 ntBASIC14.05□□□□□ -0.16
SNX18Q96RF0 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SNX18Q96RF0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.05□□□□□ -0.16
SNX18Q96RF0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms