Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CPNE2Q96FN4 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 MIR940-201ENST00000401276 94 ntBASIC13.42□□□□□ -0.26
CPNE2Q96FN4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 CEND1P1-201ENST00000451006 455 ntBASIC13.42□□□□□ -0.26
CPNE2Q96FN4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 AC005829.1-201ENST00000570002 483 ntBASIC13.42□□□□□ -0.26
CPNE2Q96FN4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 AC007967.4-201ENST00000614700 386 ntBASIC13.42□□□□□ -0.26
CPNE2Q96FN4 NME4-212ENST00000621774 904 ntTSL 3 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.42□□□□□ -0.26
CPNE2Q96FN4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 DMBT1P1-203ENST00000636837 4628 ntBASIC13.41□□□□□ -0.26
CPNE2Q96FN4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 MIR6069-201ENST00000620069 79 ntBASIC13.41□□□□□ -0.26
CPNE2Q96FN4 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CPNE2Q96FN4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms