Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 KRT8P22-201ENST00000562317 1415 ntBASIC15.26■□□□□ 0.03
SH3KBP1Q96B97 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 AC020658.6-201ENST00000623564 1870 ntBASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 AC134915.1-201ENST00000426461 574 ntBASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 ENPP7P5-201ENST00000541031 1031 ntBASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SH3KBP1Q96B97 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 KRT18P64-201ENST00000434946 1219 ntBASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms