Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF34Q969K3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RNF34Q969K3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF34Q969K3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF34Q969K3 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RNF34Q969K3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF34Q969K3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF34Q969K3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF34Q969K3 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF34Q969K3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF34Q969K3 AL596325.1-201ENST00000563991 1082 ntBASIC16.07■□□□□ 0.16
RNF34Q969K3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF34Q969K3 AC239800.4-201ENST00000603712 296 ntBASIC16.07■□□□□ 0.16
RNF34Q969K3 AC093813.1-201ENST00000605066 256 ntBASIC16.07■□□□□ 0.16
RNF34Q969K3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.07■□□□□ 0.16
RNF34Q969K3 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 CU634019.7-201ENST00000624153 1185 ntBASIC16.07■□□□□ 0.16
RNF34Q969K3 FP236241.2-201ENST00000624906 1185 ntBASIC16.07■□□□□ 0.16
RNF34Q969K3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF34Q969K3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF34Q969K3 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF34Q969K3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
RNF34Q969K3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
RNF34Q969K3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RNF34Q969K3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.07■□□□□ 0.16
RNF34Q969K3 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RNF34Q969K3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
RNF34Q969K3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF34Q969K3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 AC112693.3-201ENST00000624819 1983 ntBASIC16.07■□□□□ 0.16
RNF34Q969K3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
RNF34Q969K3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF34Q969K3 AL162727.3-201ENST00000635661 2787 ntBASIC16.07■□□□□ 0.16
RNF34Q969K3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF34Q969K3 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF34Q969K3 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RNF34Q969K3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF34Q969K3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF34Q969K3 MST1L-201ENST00000442552 2185 ntBASIC16.06■□□□□ 0.16
RNF34Q969K3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF34Q969K3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF34Q969K3 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RNF34Q969K3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF34Q969K3 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF34Q969K3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF34Q969K3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF34Q969K3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF34Q969K3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF34Q969K3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF34Q969K3 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RNF34Q969K3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF34Q969K3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RNF34Q969K3 AC063926.2-201ENST00000623766 1308 ntBASIC16.06■□□□□ 0.16
RNF34Q969K3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF34Q969K3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF34Q969K3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF34Q969K3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF34Q969K3 AL162726.2-201ENST00000438986 1017 ntBASIC16.06■□□□□ 0.16
RNF34Q969K3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.06■□□□□ 0.16
RNF34Q969K3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF34Q969K3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF34Q969K3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.06■□□□□ 0.16
RNF34Q969K3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.06■□□□□ 0.16
RNF34Q969K3 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF34Q969K3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.06■□□□□ 0.16
RNF34Q969K3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF34Q969K3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RNF34Q969K3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
RNF34Q969K3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RNF34Q969K3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF34Q969K3 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF34Q969K3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF34Q969K3 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF34Q969K3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF34Q969K3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF34Q969K3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF34Q969K3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF34Q969K3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms