Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 KRT18P3-201ENST00000451602 1288 ntBASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 AC105233.2-201ENST00000523697 349 ntBASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 AF228730.5-201ENST00000530288 346 ntBASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 AC027601.4-201ENST00000611259 610 ntBASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 AC015802.1-201ENST00000588104 1449 ntBASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.23■□□□□ 0.03
RFWD2Q8NHY2 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 AL022342.1-201ENST00000400363 863 ntBASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 AZGP1P1-201ENST00000411909 902 ntBASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RFWD2Q8NHY2 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFWD2Q8NHY2 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
RFWD2Q8NHY2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RFWD2Q8NHY2 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.21■□□□□ 0.03
RFWD2Q8NHY2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RFWD2Q8NHY2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFWD2Q8NHY2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFWD2Q8NHY2 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RFWD2Q8NHY2 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RFWD2Q8NHY2 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFWD2Q8NHY2 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RFWD2Q8NHY2 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.21■□□□□ 0.03
RFWD2Q8NHY2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFWD2Q8NHY2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RFWD2Q8NHY2 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RFWD2Q8NHY2 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms