Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AQP7P3-201ENST00000624547 1041 ntBASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 FKBP4P6-201ENST00000457486 1332 ntBASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 CR383656.3-201ENST00000551315 183 ntBASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCDC168Q8NDH2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 RN7SKP175-201ENST00000408472 289 ntBASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 KRT17P4-201ENST00000429445 819 ntBASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 MRPL22P1-201ENST00000505398 616 ntBASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 PEBP1P2-201ENST00000603980 558 ntBASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 HMGB1P24-201ENST00000611897 328 ntBASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 AC239868.1-201ENST00000369385 493 ntBASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 MIR3677-201ENST00000578964 60 ntBASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 RN7SL470P-201ENST00000583069 259 ntBASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CCDC168Q8NDH2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 AL161772.1-201ENST00000610494 4412 ntBASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 AP000593.2-201ENST00000542775 1433 ntBASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 HIST2H2BA-201ENST00000412169 381 ntBASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.65□□□□□ -0.38
CCDC168Q8NDH2 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms