Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 AC005252.3-201ENST00000623855 2258 ntBASIC14.03□□□□□ -0.16
CLDN22Q8N7P3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN22Q8N7P3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
CLDN22Q8N7P3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CLDN22Q8N7P3 AC097376.2-205ENST00000610159 5334 ntBASIC14.02□□□□□ -0.16
CLDN22Q8N7P3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CLDN22Q8N7P3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.02□□□□□ -0.16
CLDN22Q8N7P3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN22Q8N7P3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN22Q8N7P3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CLDN22Q8N7P3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN22Q8N7P3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN22Q8N7P3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN22Q8N7P3 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.02□□□□□ -0.16
CLDN22Q8N7P3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN22Q8N7P3 AC136759.1-202ENST00000530858 2194 ntBASIC14.02□□□□□ -0.16
CLDN22Q8N7P3 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN22Q8N7P3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CLDN22Q8N7P3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN22Q8N7P3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN22Q8N7P3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN22Q8N7P3 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN22Q8N7P3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN22Q8N7P3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDN22Q8N7P3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
CLDN22Q8N7P3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CLDN22Q8N7P3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.02□□□□□ -0.16
CLDN22Q8N7P3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.02□□□□□ -0.16
CLDN22Q8N7P3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 MIR1233-2-201ENST00000408138 82 ntBASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 MIR1233-1-201ENST00000408722 82 ntBASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 AC074338.1-201ENST00000416825 156 ntBASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 AL589739.1-201ENST00000607720 493 ntBASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 HSPA7-201ENST00000445535 1927 ntBASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 BX640514.1-201ENST00000583223 1918 ntBASIC14.02□□□□□ -0.17
CLDN22Q8N7P3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 RPL37AP1-201ENST00000412502 279 ntBASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 AL080243.2-201ENST00000418783 582 ntBASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 SPDYE7P-202ENST00000420373 878 ntBASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 AC069262.1-201ENST00000539058 672 ntBASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 MIR6069-201ENST00000620069 79 ntBASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 Z92544.3-201ENST00000624747 417 ntBASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDN22Q8N7P3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN22Q8N7P3 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CLDN22Q8N7P3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLDN22Q8N7P3 SBF1P1-201ENST00000444527 5631 ntBASIC14□□□□□ -0.17
CLDN22Q8N7P3 ZBTB45P1-201ENST00000452761 1456 ntBASIC14□□□□□ -0.17
CLDN22Q8N7P3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CLDN22Q8N7P3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms