Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 DPM3-202ENST00000368399 517 ntBASIC16.53■□□□□ 0.24
HERC6Q8IVU3 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 AL645937.2-201ENST00000396808 931 ntBASIC16.53■□□□□ 0.24
HERC6Q8IVU3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 ACTG1P2-201ENST00000415776 1125 ntBASIC16.53■□□□□ 0.24
HERC6Q8IVU3 AC007274.2-201ENST00000421675 662 ntBASIC16.53■□□□□ 0.24
HERC6Q8IVU3 ACTG1P11-201ENST00000425411 1125 ntBASIC16.53■□□□□ 0.24
HERC6Q8IVU3 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 CHMP1AP1-201ENST00000445563 662 ntBASIC16.53■□□□□ 0.24
HERC6Q8IVU3 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 AC100850.1-201ENST00000506768 649 ntBASIC16.53■□□□□ 0.24
HERC6Q8IVU3 AL391280.1-201ENST00000506969 1062 ntBASIC16.53■□□□□ 0.24
HERC6Q8IVU3 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 AP003171.2-201ENST00000528208 925 ntBASIC16.53■□□□□ 0.24
HERC6Q8IVU3 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 AL023803.2-201ENST00000620080 638 ntBASIC16.53■□□□□ 0.24
HERC6Q8IVU3 AC022748.3-201ENST00000621828 275 ntBASIC16.53■□□□□ 0.24
HERC6Q8IVU3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 AC007950.2-201ENST00000615045 2347 ntBASIC16.53■□□□□ 0.24
HERC6Q8IVU3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.53■□□□□ 0.24
HERC6Q8IVU3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 AL662844.4-201ENST00000606367 2838 ntBASIC16.52■□□□□ 0.24
HERC6Q8IVU3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 MTHFR-217ENST00000641820 1569 ntBASIC16.52■□□□□ 0.24
HERC6Q8IVU3 AC006480.2-201ENST00000609770 1337 ntBASIC16.52■□□□□ 0.24
HERC6Q8IVU3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 POM121L8P-201ENST00000417732 1281 ntBASIC16.52■□□□□ 0.24
HERC6Q8IVU3 POM121L9P-203ENST00000441984 1285 ntBASIC16.52■□□□□ 0.24
HERC6Q8IVU3 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 AC026740.1-201ENST00000607068 791 ntBASIC16.52■□□□□ 0.24
HERC6Q8IVU3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.52■□□□□ 0.24
HERC6Q8IVU3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
HERC6Q8IVU3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
HERC6Q8IVU3 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
HERC6Q8IVU3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.52■□□□□ 0.23
HERC6Q8IVU3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HERC6Q8IVU3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
HERC6Q8IVU3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
HERC6Q8IVU3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HERC6Q8IVU3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
HERC6Q8IVU3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HERC6Q8IVU3 HYMAI-201ENST00000635591 3347 ntBASIC16.52■□□□□ 0.23
HERC6Q8IVU3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HERC6Q8IVU3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC6Q8IVU3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms