Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CPNE8Q86YQ8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE8Q86YQ8 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CPNE8Q86YQ8 HLA-K-203ENST00000430151 1046 ntBASIC16.05■□□□□ 0.16
CPNE8Q86YQ8 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.05■□□□□ 0.16
CPNE8Q86YQ8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.05■□□□□ 0.16
CPNE8Q86YQ8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.05■□□□□ 0.16
CPNE8Q86YQ8 MIR8072-201ENST00000614241 80 ntBASIC16.05■□□□□ 0.16
CPNE8Q86YQ8 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CPNE8Q86YQ8 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE8Q86YQ8 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE8Q86YQ8 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE8Q86YQ8 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE8Q86YQ8 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE8Q86YQ8 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE8Q86YQ8 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE8Q86YQ8 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE8Q86YQ8 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE8Q86YQ8 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 DRD5P1-201ENST00000456605 1438 ntBASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 AL360270.3-201ENST00000609118 1348 ntBASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 AC006538.3-201ENST00000612495 578 ntBASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 AC007787.1-201ENST00000588095 1583 ntBASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CPNE8Q86YQ8 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 AC107373.2-201ENST00000607735 490 ntBASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.03■□□□□ 0.16
CPNE8Q86YQ8 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms