Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC17.7■□□□□ 0.42
USP50Q70EL3 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC17.7■□□□□ 0.42
USP50Q70EL3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP50Q70EL3 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
USP50Q70EL3 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP50Q70EL3 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC17.7■□□□□ 0.42
USP50Q70EL3 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC17.7■□□□□ 0.42
USP50Q70EL3 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP50Q70EL3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.7■□□□□ 0.42
USP50Q70EL3 LINC02447-202ENST00000501888 2146 ntBASIC17.7■□□□□ 0.42
USP50Q70EL3 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP50Q70EL3 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC17.7■□□□□ 0.42
USP50Q70EL3 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP50Q70EL3 AP000911.2-201ENST00000534330 502 ntBASIC17.7■□□□□ 0.42
USP50Q70EL3 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP50Q70EL3 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC17.7■□□□□ 0.42
USP50Q70EL3 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC17.7■□□□□ 0.42
USP50Q70EL3 MIR3180-2-201ENST00000581748 88 ntBASIC17.7■□□□□ 0.42
USP50Q70EL3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.7■□□□□ 0.42
USP50Q70EL3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP50Q70EL3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP50Q70EL3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
USP50Q70EL3 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP50Q70EL3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
USP50Q70EL3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP50Q70EL3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP50Q70EL3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
USP50Q70EL3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP50Q70EL3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP50Q70EL3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
USP50Q70EL3 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC17.69■□□□□ 0.42
USP50Q70EL3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP50Q70EL3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP50Q70EL3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.69■□□□□ 0.42
USP50Q70EL3 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP50Q70EL3 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP50Q70EL3 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP50Q70EL3 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC17.69■□□□□ 0.42
USP50Q70EL3 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC17.69■□□□□ 0.42
USP50Q70EL3 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC17.69■□□□□ 0.42
USP50Q70EL3 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.69■□□□□ 0.42
USP50Q70EL3 DBP-202ENST00000593500 712 ntTSL 2 BASIC17.69■□□□□ 0.42
USP50Q70EL3 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP50Q70EL3 AP003392.6-201ENST00000607709 325 ntBASIC17.69■□□□□ 0.42
USP50Q70EL3 BX088702.1-201ENST00000610784 235 ntBASIC17.69■□□□□ 0.42
USP50Q70EL3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.69■□□□□ 0.42
USP50Q70EL3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
USP50Q70EL3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP50Q70EL3 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.69■□□□□ 0.42
USP50Q70EL3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
USP50Q70EL3 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
USP50Q70EL3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP50Q70EL3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP50Q70EL3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.69■□□□□ 0.42
USP50Q70EL3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP50Q70EL3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP50Q70EL3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP50Q70EL3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP50Q70EL3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP50Q70EL3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP50Q70EL3 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
USP50Q70EL3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP50Q70EL3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
USP50Q70EL3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.68■□□□□ 0.42
USP50Q70EL3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
USP50Q70EL3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP50Q70EL3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP50Q70EL3 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP50Q70EL3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP50Q70EL3 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP50Q70EL3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP50Q70EL3 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP50Q70EL3 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP50Q70EL3 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP50Q70EL3 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP50Q70EL3 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
USP50Q70EL3 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC17.68■□□□□ 0.42
USP50Q70EL3 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC17.68■□□□□ 0.42
USP50Q70EL3 AC084752.1-201ENST00000509766 622 ntBASIC17.68■□□□□ 0.42
USP50Q70EL3 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
USP50Q70EL3 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC17.68■□□□□ 0.42
USP50Q70EL3 AC012158.2-201ENST00000536546 354 ntBASIC17.68■□□□□ 0.42
USP50Q70EL3 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
USP50Q70EL3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP50Q70EL3 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC17.68■□□□□ 0.42
USP50Q70EL3 AC011247.3-201ENST00000603297 438 ntBASIC17.68■□□□□ 0.42
USP50Q70EL3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.68■□□□□ 0.42
USP50Q70EL3 AC073592.2-201ENST00000623062 780 ntBASIC17.68■□□□□ 0.42
USP50Q70EL3 CMC2-224ENST00000630396 481 ntTSL 5 BASIC17.68■□□□□ 0.42
USP50Q70EL3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP50Q70EL3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.68■□□□□ 0.42
USP50Q70EL3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.68■□□□□ 0.42
USP50Q70EL3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP50Q70EL3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP50Q70EL3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP50Q70EL3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.68■□□□□ 0.42
USP50Q70EL3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP50Q70EL3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP50Q70EL3 IL9RP3-201ENST00000442856 1674 ntBASIC17.67■□□□□ 0.42
USP50Q70EL3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms