Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.33■□□□□ 0.2
VSTM1Q6UX27 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.33■□□□□ 0.2
VSTM1Q6UX27 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VSTM1Q6UX27 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.33■□□□□ 0.2
VSTM1Q6UX27 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
VSTM1Q6UX27 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VSTM1Q6UX27 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.33■□□□□ 0.2
VSTM1Q6UX27 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.33■□□□□ 0.2
VSTM1Q6UX27 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.33■□□□□ 0.2
VSTM1Q6UX27 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VSTM1Q6UX27 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
VSTM1Q6UX27 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VSTM1Q6UX27 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VSTM1Q6UX27 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
VSTM1Q6UX27 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.33■□□□□ 0.2
VSTM1Q6UX27 AC112693.3-201ENST00000624819 1983 ntBASIC16.33■□□□□ 0.2
VSTM1Q6UX27 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VSTM1Q6UX27 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
VSTM1Q6UX27 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VSTM1Q6UX27 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VSTM1Q6UX27 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.33■□□□□ 0.2
VSTM1Q6UX27 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VSTM1Q6UX27 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VSTM1Q6UX27 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 AP001582.1-201ENST00000525856 295 ntBASIC16.32■□□□□ 0.2
VSTM1Q6UX27 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 AC134312.5-201ENST00000568031 1313 ntBASIC16.32■□□□□ 0.2
VSTM1Q6UX27 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 AC007292.2-201ENST00000593524 1812 ntBASIC16.32■□□□□ 0.2
VSTM1Q6UX27 MIR6805-201ENST00000615055 62 ntBASIC16.32■□□□□ 0.2
VSTM1Q6UX27 AP005019.2-201ENST00000615104 511 ntBASIC16.32■□□□□ 0.2
VSTM1Q6UX27 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.32■□□□□ 0.2
VSTM1Q6UX27 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
VSTM1Q6UX27 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.31■□□□□ 0.2
VSTM1Q6UX27 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 AL008721.1-201ENST00000609964 604 ntBASIC16.31■□□□□ 0.2
VSTM1Q6UX27 BX539320.1-201ENST00000623759 877 ntBASIC16.31■□□□□ 0.2
VSTM1Q6UX27 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 LINC01101-201ENST00000622953 1884 ntBASIC16.31■□□□□ 0.2
VSTM1Q6UX27 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VSTM1Q6UX27 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.3■□□□□ 0.2
VSTM1Q6UX27 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.3■□□□□ 0.2
VSTM1Q6UX27 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.3■□□□□ 0.2
VSTM1Q6UX27 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VSTM1Q6UX27 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
VSTM1Q6UX27 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VSTM1Q6UX27 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms