Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 RPL18P13-201ENST00000478088 569 ntBASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 RTN3P1-201ENST00000536295 711 ntBASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 DUX4L46-201ENST00000566845 751 ntBASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 MIR3147-201ENST00000577811 66 ntBASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LYSMD4Q5XG99 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 RCC2P8-201ENST00000502779 1035 ntBASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 AC019193.1-201ENST00000506678 823 ntBASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 AC116345.2-201ENST00000512837 523 ntBASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 AC103988.2-201ENST00000561804 725 ntBASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 MIR4783-201ENST00000580343 82 ntBASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 AL132994.2-201ENST00000603120 687 ntBASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 AC018635.2-201ENST00000608625 364 ntBASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 AP003419.4-201ENST00000616071 517 ntBASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 AC006453.1-201ENST00000636037 1257 ntBASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 E2F3P2-201ENST00000447755 1422 ntBASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LYSMD4Q5XG99 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 AC112504.1-201ENST00000623415 1841 ntBASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 TNRC18P3-201ENST00000441896 2691 ntBASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
LYSMD4Q5XG99 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms