Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 CYP4F36P-201ENST00000589193 186 ntBASIC14.61□□□□□ -0.07
RIF1Q5UIP0 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 AC254633.1-201ENST00000606790 345 ntBASIC14.61□□□□□ -0.07
RIF1Q5UIP0 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.61□□□□□ -0.07
RIF1Q5UIP0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 AC060834.1-201ENST00000443027 2032 ntBASIC14.61□□□□□ -0.07
RIF1Q5UIP0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 HCG11-201ENST00000411553 5696 ntBASIC14.61□□□□□ -0.07
RIF1Q5UIP0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RIF1Q5UIP0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 DUX4L47-201ENST00000566374 394 ntBASIC14.6□□□□□ -0.07
RIF1Q5UIP0 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 AC090510.3-201ENST00000615831 821 ntBASIC14.6□□□□□ -0.07
RIF1Q5UIP0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 AC011477.6-201ENST00000604980 1927 ntBASIC14.6□□□□□ -0.07
RIF1Q5UIP0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 REXO1L5P-201ENST00000622260 2098 ntBASIC14.6□□□□□ -0.07
RIF1Q5UIP0 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RIF1Q5UIP0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 AC063952.3-201ENST00000467756 308 ntBASIC14.59□□□□□ -0.07
RIF1Q5UIP0 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 SRP14-204ENST00000558720 780 ntTSL 2 BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RIF1Q5UIP0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms