Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
ATPAF1Q5TC12 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
ATPAF1Q5TC12 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 CETN4P-206ENST00000642099 2168 ntBASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 PMS2P2-201ENST00000425039 1128 ntBASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 AC125807.1-201ENST00000483097 614 ntBASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 AL079307.3-201ENST00000556114 283 ntBASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 KRT8P37-201ENST00000451609 1420 ntBASIC13.39□□□□□ -0.27
ATPAF1Q5TC12 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATPAF1Q5TC12 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms