Protein–RNA interactions for Protein: Q53SF7

COBLL1, Cordon-bleu protein-like 1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COBLL1Q53SF7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.77■□□□□ 0.28
COBLL1Q53SF7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
COBLL1Q53SF7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.77■□□□□ 0.28
COBLL1Q53SF7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
COBLL1Q53SF7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
COBLL1Q53SF7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.77■□□□□ 0.28
COBLL1Q53SF7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
COBLL1Q53SF7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COBLL1Q53SF7 AC124283.3-201ENST00000570869 594 ntBASIC16.77■□□□□ 0.28
COBLL1Q53SF7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COBLL1Q53SF7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
COBLL1Q53SF7 BX539320.1-201ENST00000623759 877 ntBASIC16.77■□□□□ 0.28
COBLL1Q53SF7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
COBLL1Q53SF7 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
COBLL1Q53SF7 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.77■□□□□ 0.27
COBLL1Q53SF7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
COBLL1Q53SF7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
COBLL1Q53SF7 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
COBLL1Q53SF7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
COBLL1Q53SF7 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 FLJ16779-201ENST00000612722 7638 ntBASIC16.76■□□□□ 0.27
COBLL1Q53SF7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 GNAQP1-201ENST00000444815 1067 ntBASIC16.76■□□□□ 0.27
COBLL1Q53SF7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 RNA5SP421-201ENST00000516864 134 ntBASIC16.76■□□□□ 0.27
COBLL1Q53SF7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 AC093726.1-201ENST00000608064 963 ntBASIC16.76■□□□□ 0.27
COBLL1Q53SF7 AC009118.2-201ENST00000613275 655 ntBASIC16.76■□□□□ 0.27
COBLL1Q53SF7 MIR8072-201ENST00000614241 80 ntBASIC16.76■□□□□ 0.27
COBLL1Q53SF7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 KRT8P22-201ENST00000562317 1415 ntBASIC16.76■□□□□ 0.27
COBLL1Q53SF7 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
COBLL1Q53SF7 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 AC134915.1-201ENST00000426461 574 ntBASIC16.75■□□□□ 0.27
COBLL1Q53SF7 CYMP-203ENST00000474680 1263 ntBASIC16.75■□□□□ 0.27
COBLL1Q53SF7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 GPALPP1-207ENST00000611650 899 ntBASIC16.75■□□□□ 0.27
COBLL1Q53SF7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
COBLL1Q53SF7 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms