Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 KRT18P3-201ENST00000451602 1288 ntBASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 AC034105.1-201ENST00000563488 319 ntBASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 AC023141.13-201ENST00000604991 943 ntBASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.8□□□□□ -0.36
ANKRD55Q3KP44 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 MST1P2-201ENST00000457982 2291 ntBASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 AC138969.2-201ENST00000532739 9932 ntBASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 MIR574-201ENST00000385209 96 ntBASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 AL161645.1-201ENST00000622716 1255 ntBASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 AC007064.4-201ENST00000637740 555 ntBASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 AC067750.1-201ENST00000608826 6545 ntBASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ANKRD55Q3KP44 CICP20-201ENST00000443330 2801 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms