Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
PCDH1Q08174 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.82□□□□□ -0.04
PCDH1Q08174 AL353779.1-201ENST00000434793 351 ntBASIC14.82□□□□□ -0.04
PCDH1Q08174 AC093004.1-201ENST00000508850 424 ntBASIC14.82□□□□□ -0.04
PCDH1Q08174 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDH1Q08174 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
PCDH1Q08174 AC023310.3-201ENST00000557027 670 ntBASIC14.82□□□□□ -0.04
PCDH1Q08174 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.82□□□□□ -0.04
PCDH1Q08174 AC100756.1-201ENST00000562736 682 ntBASIC14.82□□□□□ -0.04
PCDH1Q08174 AC138749.3-201ENST00000567691 622 ntBASIC14.82□□□□□ -0.04
PCDH1Q08174 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
PCDH1Q08174 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDH1Q08174 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDH1Q08174 AC116165.1-201ENST00000611806 668 ntBASIC14.82□□□□□ -0.04
PCDH1Q08174 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 AL360270.3-201ENST00000609118 1348 ntBASIC14.82□□□□□ -0.04
PCDH1Q08174 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDH1Q08174 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDH1Q08174 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
PCDH1Q08174 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDH1Q08174 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 AJ011931.1-201ENST00000618749 2492 ntBASIC14.82□□□□□ -0.04
PCDH1Q08174 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDH1Q08174 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.82□□□□□ -0.04
PCDH1Q08174 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDH1Q08174 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDH1Q08174 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDH1Q08174 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PCDH1Q08174 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PCDH1Q08174 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDH1Q08174 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PCDH1Q08174 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDH1Q08174 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDH1Q08174 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDH1Q08174 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDH1Q08174 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDH1Q08174 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDH1Q08174 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDH1Q08174 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDH1Q08174 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDH1Q08174 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDH1Q08174 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDH1Q08174 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDH1Q08174 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDH1Q08174 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDH1Q08174 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PCDH1Q08174 MIR770-201ENST00000390219 98 ntBASIC14.81□□□□□ -0.04
PCDH1Q08174 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.81□□□□□ -0.04
PCDH1Q08174 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDH1Q08174 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PCDH1Q08174 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.81□□□□□ -0.04
PCDH1Q08174 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDH1Q08174 RPL13AP25-201ENST00000484130 612 ntBASIC14.81□□□□□ -0.04
PCDH1Q08174 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDH1Q08174 AC093214.1-201ENST00000511688 1107 ntBASIC14.81□□□□□ -0.04
PCDH1Q08174 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.81□□□□□ -0.04
PCDH1Q08174 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.81□□□□□ -0.04
PCDH1Q08174 TPRX2P-201ENST00000535362 881 ntBASIC14.81□□□□□ -0.04
PCDH1Q08174 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDH1Q08174 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDH1Q08174 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.81□□□□□ -0.04
PCDH1Q08174 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDH1Q08174 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDH1Q08174 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
PCDH1Q08174 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDH1Q08174 PRSS30P-206ENST00000641773 873 ntBASIC14.81□□□□□ -0.04
PCDH1Q08174 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDH1Q08174 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
PCDH1Q08174 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PCDH1Q08174 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDH1Q08174 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDH1Q08174 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDH1Q08174 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDH1Q08174 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDH1Q08174 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDH1Q08174 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDH1Q08174 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDH1Q08174 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PCDH1Q08174 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDH1Q08174 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDH1Q08174 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDH1Q08174 FGD5P1-202ENST00000614866 2498 ntBASIC14.81□□□□□ -0.04
PCDH1Q08174 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH1Q08174 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PCDH1Q08174 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDH1Q08174 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms