Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.91■□□□□ 0.78
COL16A1Q07092 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.91■□□□□ 0.78
COL16A1Q07092 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
COL16A1Q07092 PKD1P6-201ENST00000343738 4769 ntBASIC19.91■□□□□ 0.78
COL16A1Q07092 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC19.91■□□□□ 0.78
COL16A1Q07092 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
COL16A1Q07092 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL16A1Q07092 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL16A1Q07092 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL16A1Q07092 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL16A1Q07092 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC19.91■□□□□ 0.78
COL16A1Q07092 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC19.91■□□□□ 0.78
COL16A1Q07092 IGKV1OR-2-201ENST00000457995 350 ntBASIC19.91■□□□□ 0.78
COL16A1Q07092 RPS18P9-201ENST00000482817 460 ntBASIC19.91■□□□□ 0.78
COL16A1Q07092 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC19.91■□□□□ 0.78
COL16A1Q07092 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC19.91■□□□□ 0.78
COL16A1Q07092 BCL2L12P1-201ENST00000508390 733 ntBASIC19.91■□□□□ 0.78
COL16A1Q07092 CD164-210ENST00000512821 964 ntTSL 2 BASIC19.91■□□□□ 0.78
COL16A1Q07092 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC19.91■□□□□ 0.78
COL16A1Q07092 F11R-204ENST00000537746 1245 ntTSL 2 BASIC19.91■□□□□ 0.78
COL16A1Q07092 GOLGA2P7-209ENST00000560408 745 ntBASIC19.91■□□□□ 0.78
COL16A1Q07092 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL16A1Q07092 AC011676.5-201ENST00000624864 2660 ntBASIC19.9■□□□□ 0.78
COL16A1Q07092 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL16A1Q07092 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL16A1Q07092 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL16A1Q07092 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL16A1Q07092 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL16A1Q07092 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL16A1Q07092 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL16A1Q07092 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC19.9■□□□□ 0.78
COL16A1Q07092 RPL14-203ENST00000416518 812 ntTSL 3 BASIC19.9■□□□□ 0.78
COL16A1Q07092 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC19.9■□□□□ 0.78
COL16A1Q07092 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC19.9■□□□□ 0.78
COL16A1Q07092 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC19.9■□□□□ 0.78
COL16A1Q07092 RN7SL846P-201ENST00000467429 292 ntBASIC19.9■□□□□ 0.78
COL16A1Q07092 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC19.9■□□□□ 0.78
COL16A1Q07092 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC19.9■□□□□ 0.78
COL16A1Q07092 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC19.9■□□□□ 0.78
COL16A1Q07092 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC19.9■□□□□ 0.78
COL16A1Q07092 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC19.9■□□□□ 0.78
COL16A1Q07092 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COL16A1Q07092 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL16A1Q07092 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL16A1Q07092 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL16A1Q07092 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL16A1Q07092 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
COL16A1Q07092 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
COL16A1Q07092 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
COL16A1Q07092 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
COL16A1Q07092 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL16A1Q07092 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC19.89■□□□□ 0.78
COL16A1Q07092 AL590440.2-201ENST00000641973 1595 ntBASIC19.89■□□□□ 0.78
COL16A1Q07092 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL16A1Q07092 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
COL16A1Q07092 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL16A1Q07092 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC19.89■□□□□ 0.77
COL16A1Q07092 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
COL16A1Q07092 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL16A1Q07092 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL16A1Q07092 RN7SL530P-201ENST00000485097 298 ntBASIC19.89■□□□□ 0.77
COL16A1Q07092 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC19.89■□□□□ 0.77
COL16A1Q07092 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC19.89■□□□□ 0.77
COL16A1Q07092 AC023968.2-201ENST00000560593 1049 ntBASIC19.89■□□□□ 0.77
COL16A1Q07092 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC19.89■□□□□ 0.77
COL16A1Q07092 AC142086.5-202ENST00000562500 217 ntBASIC19.89■□□□□ 0.77
COL16A1Q07092 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC19.89■□□□□ 0.77
COL16A1Q07092 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC19.89■□□□□ 0.77
COL16A1Q07092 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC19.89■□□□□ 0.77
COL16A1Q07092 AC006372.4-201ENST00000624122 1543 ntBASIC19.89■□□□□ 0.77
COL16A1Q07092 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.89■□□□□ 0.77
COL16A1Q07092 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL16A1Q07092 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL16A1Q07092 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL16A1Q07092 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COL16A1Q07092 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC19.89■□□□□ 0.77
COL16A1Q07092 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.89■□□□□ 0.77
COL16A1Q07092 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
COL16A1Q07092 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL16A1Q07092 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL16A1Q07092 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL16A1Q07092 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL16A1Q07092 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
COL16A1Q07092 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
COL16A1Q07092 REXO1L2P-201ENST00000425429 2069 ntBASIC19.88■□□□□ 0.77
COL16A1Q07092 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC19.88■□□□□ 0.77
COL16A1Q07092 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL16A1Q07092 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC19.88■□□□□ 0.77
COL16A1Q07092 SNORA57-201ENST00000383870 149 ntBASIC19.88■□□□□ 0.77
COL16A1Q07092 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL16A1Q07092 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC19.88■□□□□ 0.77
COL16A1Q07092 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC19.88■□□□□ 0.77
COL16A1Q07092 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC19.88■□□□□ 0.77
COL16A1Q07092 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC19.88■□□□□ 0.77
COL16A1Q07092 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC19.88■□□□□ 0.77
COL16A1Q07092 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC19.88■□□□□ 0.77
COL16A1Q07092 AC018638.5-201ENST00000450885 754 ntBASIC19.88■□□□□ 0.77
COL16A1Q07092 RPS23-207ENST00000511844 530 ntTSL 2 BASIC19.88■□□□□ 0.77
COL16A1Q07092 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL16A1Q07092 LINC00244-201ENST00000625073 613 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms