Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
RPL39P62891 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RPL39P62891 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
RPL39P62891 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC10.9□□□□□ -0.66
RPL39P62891 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC10.9□□□□□ -0.66
RPL39P62891 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RPL39P62891 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RPL39P62891 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RPL39P62891 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RPL39P62891 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
RPL39P62891 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
RPL39P62891 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
RPL39P62891 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC10.9□□□□□ -0.66
RPL39P62891 CRCP-205ENST00000431089 942 ntTSL 2 BASIC10.9□□□□□ -0.66
RPL39P62891 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC10.9□□□□□ -0.66
RPL39P62891 EEF1DP4-201ENST00000446006 880 ntBASIC10.9□□□□□ -0.66
RPL39P62891 AL139010.1-201ENST00000454878 894 ntBASIC10.9□□□□□ -0.66
RPL39P62891 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC10.9□□□□□ -0.66
RPL39P62891 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RPL39P62891 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC10.9□□□□□ -0.66
RPL39P62891 ARL16-209ENST00000573715 763 ntTSL 3 BASIC10.9□□□□□ -0.66
RPL39P62891 ARL16-211ENST00000576135 694 ntTSL 3 BASIC10.9□□□□□ -0.66
RPL39P62891 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC10.9□□□□□ -0.66
RPL39P62891 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
RPL39P62891 AC011467.4-201ENST00000594891 528 ntBASIC10.9□□□□□ -0.66
RPL39P62891 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC10.9□□□□□ -0.66
RPL39P62891 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC10.9□□□□□ -0.66
RPL39P62891 AL049840.3-201ENST00000602669 611 ntBASIC10.9□□□□□ -0.66
RPL39P62891 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC10.9□□□□□ -0.66
RPL39P62891 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC10.9□□□□□ -0.66
RPL39P62891 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC10.9□□□□□ -0.66
RPL39P62891 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RPL39P62891 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
RPL39P62891 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC10.9□□□□□ -0.66
RPL39P62891 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RPL39P62891 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
RPL39P62891 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RPL39P62891 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
RPL39P62891 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
RPL39P62891 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
RPL39P62891 SF1-209ENST00000433274 2317 ntTSL 2 BASIC10.9□□□□□ -0.67
RPL39P62891 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.67
RPL39P62891 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC10.9□□□□□ -0.67
RPL39P62891 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC10.9□□□□□ -0.67
RPL39P62891 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
RPL39P62891 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC10.9□□□□□ -0.67
RPL39P62891 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
RPL39P62891 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.67
RPL39P62891 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
RPL39P62891 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.67
RPL39P62891 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
RPL39P62891 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
RPL39P62891 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC10.89□□□□□ -0.67
RPL39P62891 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC10.89□□□□□ -0.67
RPL39P62891 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC10.89□□□□□ -0.67
RPL39P62891 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC10.89□□□□□ -0.67
RPL39P62891 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
RPL39P62891 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC10.89□□□□□ -0.67
RPL39P62891 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC10.89□□□□□ -0.67
RPL39P62891 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
RPL39P62891 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC10.89□□□□□ -0.67
RPL39P62891 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC10.89□□□□□ -0.67
RPL39P62891 AC092135.3-201ENST00000624151 1846 ntBASIC10.89□□□□□ -0.67
RPL39P62891 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC10.89□□□□□ -0.67
RPL39P62891 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC10.89□□□□□ -0.67
RPL39P62891 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC10.89□□□□□ -0.67
RPL39P62891 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
RPL39P62891 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC10.89□□□□□ -0.67
RPL39P62891 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
RPL39P62891 CSF3-203ENST00000394148 622 ntTSL 3 BASIC10.89□□□□□ -0.67
RPL39P62891 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC10.89□□□□□ -0.67
RPL39P62891 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
RPL39P62891 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
RPL39P62891 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC10.89□□□□□ -0.67
RPL39P62891 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC10.89□□□□□ -0.67
RPL39P62891 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC10.89□□□□□ -0.67
RPL39P62891 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC10.89□□□□□ -0.67
RPL39P62891 AL121912.1-201ENST00000603683 238 ntBASIC10.89□□□□□ -0.67
RPL39P62891 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC10.89□□□□□ -0.67
RPL39P62891 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
RPL39P62891 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms