Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VSX2P58304 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VSX2P58304 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VSX2P58304 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VSX2P58304 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VSX2P58304 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VSX2P58304 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VSX2P58304 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VSX2P58304 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VSX2P58304 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
VSX2P58304 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.71□□□□□ -0.05
VSX2P58304 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
VSX2P58304 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VSX2P58304 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VSX2P58304 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.71□□□□□ -0.05
VSX2P58304 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.71□□□□□ -0.05
VSX2P58304 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VSX2P58304 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.71□□□□□ -0.05
VSX2P58304 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
VSX2P58304 PTP4A1P2-201ENST00000546033 454 ntBASIC14.71□□□□□ -0.05
VSX2P58304 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.71□□□□□ -0.05
VSX2P58304 AC009486.1-201ENST00000569860 813 ntBASIC14.71□□□□□ -0.05
VSX2P58304 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.71□□□□□ -0.05
VSX2P58304 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.71□□□□□ -0.05
VSX2P58304 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.71□□□□□ -0.05
VSX2P58304 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.71□□□□□ -0.05
VSX2P58304 AC126177.1-201ENST00000547829 2218 ntBASIC14.71□□□□□ -0.05
VSX2P58304 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VSX2P58304 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VSX2P58304 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.71□□□□□ -0.05
VSX2P58304 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VSX2P58304 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VSX2P58304 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VSX2P58304 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
VSX2P58304 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
VSX2P58304 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
VSX2P58304 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
VSX2P58304 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.71□□□□□ -0.06
VSX2P58304 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VSX2P58304 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
VSX2P58304 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.7□□□□□ -0.06
VSX2P58304 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
VSX2P58304 AC099063.4-201ENST00000641099 1602 ntBASIC14.7□□□□□ -0.06
VSX2P58304 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.7□□□□□ -0.06
VSX2P58304 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
VSX2P58304 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.7□□□□□ -0.06
VSX2P58304 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.7□□□□□ -0.06
VSX2P58304 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.7□□□□□ -0.06
VSX2P58304 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
VSX2P58304 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
VSX2P58304 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.7□□□□□ -0.06
VSX2P58304 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
VSX2P58304 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.7□□□□□ -0.06
VSX2P58304 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
VSX2P58304 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.7□□□□□ -0.06
VSX2P58304 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 U91328.1-201ENST00000437528 223 ntBASIC14.7□□□□□ -0.06
VSX2P58304 AC093433.1-201ENST00000458048 571 ntBASIC14.7□□□□□ -0.06
VSX2P58304 AC004066.1-201ENST00000502488 802 ntBASIC14.7□□□□□ -0.06
VSX2P58304 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.7□□□□□ -0.06
VSX2P58304 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.7□□□□□ -0.06
VSX2P58304 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.7□□□□□ -0.06
VSX2P58304 BX539320.1-201ENST00000623759 877 ntBASIC14.7□□□□□ -0.06
VSX2P58304 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.7□□□□□ -0.06
VSX2P58304 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
VSX2P58304 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
VSX2P58304 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
VSX2P58304 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.7□□□□□ -0.06
VSX2P58304 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VSX2P58304 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.7□□□□□ -0.06
VSX2P58304 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.69□□□□□ -0.06
VSX2P58304 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VSX2P58304 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms